Entry information : Ecam1CysPrx[P]02 ( EcC045038.20)
Entry ID 10603
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2016-04-11 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-04-11 (Achraf Jemmat)
Peroxidase information: Ecam1CysPrx[P]02 ( EcC045038.20)
Name (synonym) Ecam1CysPrx[P]02 ( EcC045038.20)
Class 1-Cysteine peroxiredoxin    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ecam1CysPrx[P]02
start..stop
S start..stop
Egr1CysPrx[P]02 328 5e-117 1..189 1..190
Egu1CysPrx[P]02 321 4e-114 1..189 1..190
Egu1CysPrx03 278 1e-96 34..189 64..219
Egr1CysPrx03 278 1e-96 34..189 64..219
Literature and cross-references Ecam1CysPrx[P]02 ( EcC045038.20)
Protein sequence: Ecam1CysPrx[P]02 ( EcC045038.20)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   188 (170)
PWM (Da):   %s   20606.79 (18510.8)  
PI (pH):   %s   10.16 (10.11) Peptide Signal:   %s   cut: 19 range:19-188
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
WVMSFSWPLA MRGYTVL*Ax xGGSVRAGAR AEGGVKLLGF SCDEVKSHKA WIKDIEAFTP RAKVMYPIIA NPNREIIKEL NLVEPEEKDA SGKQVPSRAL HIVGPDKKIK LSFLYPTSMG 
KSMDEVARVL DSLQRAMKHK IATPCNWKPG DAVVISLSIS NEQAKEMSPQ GFKTADLLSR KYYLRFTHI 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (Stops in frame, 5' end is missing).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGGTGATGT CATTCTCATG GCCCCTTGCG ATGAGAGGAT ACACTGTTCT CTAGGCCnnn nnnGGTGTGC ACGACGGAGC TCGGGAAGAT GGCAGTGTAC GTGCCGGAGC CCGAGCGGAA  GGGGGGGTGA AGCTCCTGGG CTTTTCCTGC GACGAGGTCA AGTCGCACAA GGCGTGGATC AAGGACATAG AGGCCTTCAC TGTCCGCTAC TCTTCTCTCT CACTCTGCCT ATTAGACCTT  TTCATCACTT GGCATACATA TATACTGCAT GTCCTGTATT AACTTGCCTG TTTTGATATG GATGTTGGGT TTGATCTGAT TTGGGTGATT GTATTGTTCA AAAAGGAAAA GAAGGAGAAC  TTATAGAAAT ATGTGGTATT ATAATTTAGT AGATTGACCA AGGGAAGTCT CCTTATTAGG CACAATTTGG GTTAGATTGA GGTGGTTTAA TTGCGGGTCA CGGGGCTGAC TGTTCTGTCT  CACATTTGAG ATTGGGGCCT TTGGCTTTTG TGCAATTTTC ATTATTCCAA TTTCGAGCCA ACATTCTCAA TGTCGTGTTA TTGAGTGGGG GTGCAGCCCA GGGCCAAGGT GATGTACCCG  ATAATCGCCA ACCCGAATAG AGAGATCATC AAAGAGCTCA ACCTGGTCGA GCCGGAGGAG AAAGACGCTT CAGGGAAGCA AGTCCCTTCT AGAGCTCTGC ACATCGTCGG TCCTGATAAG  AAGGTATACA TGCCCTTCTA CCTTTTCCTT CTCGCGTTAA TTAAACTTGT ATCAAATGAA ACAAACTGCA TAAACCAATG CCATCTTATG CATGTCTGTG ATATGTGTAT TACTTAAAGT  AGCATAAACC AAATTTTCCC TTTTAAACAG AACAGATGCA GCAGGACTCT GGATCATCTA TTTTCACAAT ATAACATAAT TTGTTAGATC AAGCTGAGTT TCCTGTACCC CACGAGCATG  GGAAAGAGCA TGGACGAGGT GGCGAGGGTG CTGGACTCCC TGCAGAGGGC GATGAAGCAC AAGATCGCCA CCCCATGCAA CTGGAAGCCA GGGGACGCGG TCGTCATCTC GCTGTCCATC 
TCCAACGAGC AGGCCAAGGA GATGTCCCCG CAGGGCTTCA AGACCGCCGA TCTTCTGTCC AGGAAGTATT ACCTCCGCTT CACTCATATC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGGTGATGT CATTCTCATG GCCCCTTGCG ATGAGAGGAT ACACTGTTCT CTAGGCCnnn nnnGGTGGCA GTGTACGTGC CGGAGCCCGA GCGGAAGGGG GGGTGAAGCT CCTGGGCTTT  TCCTGCGACG AGGTCAAGTC GCACAAGGCG TGGATCAAGG ACATAGAGGC CTTCACTCCC AGGGCCAAGG TGATGTACCC GATAATCGCC AACCCGAATA GAGAGATCAT CAAAGAGCTC  AACCTGGTCG AGCCGGAGGA GAAAGACGCT TCAGGGAAGC AAGTCCCTTC TAGAGCTCTG CACATCGTCG GTCCTGATAA GAAGATCAAG CTGAGTTTCC TGTACCCCAC GAGCATGGGA  AAGAGCATGG ACGAGGTGGC GAGGGTGCTG GACTCCCTGC AGAGGGCGAT GAAGCACAAG ATCGCCACCC CATGCAACTG GAAGCCAGGG GACGCGGTCG TCATCTCGCT GTCCATCTCC 
AACGAGCAGG CCAAGGAGAT GTCCCCGCAG GGCTTCAAGA CCGCCGATCT TCTGTCCAGG AAGTATTACC TCCGCTTCAC TCATATC 

Retrieve as FASTA