Entry information : EcamRboh05 ( EcC054072.70)
Entry ID 10614
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2013-10-30 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-04-08 (Christophe Dunand)
Peroxidase information: EcamRboh05 ( EcC054072.70)
Name (synonym) EcamRboh05 ( EcC054072.70)
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamRboh05
start..stop
S start..stop
EgrRboh05 1018 0 1..517 445..967
EglRboh05 1015 0 1..517 418..940
EguRboh05 997 0 1..517 445..967
PtRboh04 818 0 1..517 417..926
Literature and cross-references EcamRboh05 ( EcC054072.70)
Protein sequence: EcamRboh05 ( EcC054072.70)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   517
PWM (Da):   %s   58264.33 Transmb domain:   %s   i92-114o134-156i308-325o
PI (pH):   %s   9.87
Sequence
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Send to Peroxiscan
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LILLPVCRNT ITWLRNKTRL SVAVPFDDNL NFHKVIxAAG IAVGVGLHVI SHLTCDFPRL LHASPEAYEP MKPYFGEKQP PNYWWFVKGV EGVTGILMLV LMAIAFTLAM PWFRRSKINV  PGPLKKLTGF NAFWYSHHLF VIVYTLLIVH GIKLYLAHDW YKKTTWMYLA VPVTLYACER LIRAFRSSIK PVKILKVAVY PGNVLALHMS KPHGFKYRSG QYMFVNCSAV SPFEWYTFNY  EQAPFLDHFA TEKRILGGWL DRLQPPPVGK SGLLRADCVP GGSIPRFPKI LIDGPYGAPA QDYQKYEVVL LVGLGIGATP MVSIVKDIIN NIKVKENEQD HLGSLESGGR PVSPLTPDDS  NSHYPKAGHR SSHGRGAFKT RKAYFYWVTR EQGSFEWFKG IMDEVAGMDE RQVIELHNYC TSVFEEGDAR SALIAMLQTL NHAKHGVDVV SGTRVMSHFA KPNWRQVYKK IALHHPDKRV 
GGVFYCGAPA LTKELNHLAL DFSRKTSTKF DFHKENF 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (5' end is missing due to the ending of contig). close to EcS565047.10 on short contig (Removed).
DNA
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CTCATCCTGT TGCCCGTTTG TCGAAACACC ATCACATGGC TTAGGAACAA GACCCGGTTG AGTGTTGCGG TCCCCTTCGA CGACAACCTG AACTTTCACA AGGTAATACG GCAGCGAGGT  GCTTTTATTT CCATTGTTTT TATTACTGAG AATATCATTA ATCTAATGAA ATGAGAGACT CCACATAAGA ATACTCATAT AATTAAGCAA TGGAAATATT TTGGGTATTA TCTACTATTG  TGTGTGATGA AGTATACAAT GAAATGTCAA GATTTTGCTT GCAATTCATA CTCACATTTT GCTAATTGTG AATTACTATA TCTTGTTAAC TTCATCTGAC TTTTGTTGCT CAAAATAATC  TCGACTCCGA GATCTTGATG AATAGCTTGA TCTAATATCA TATTCCCTAT GTGTACAATT CCAGGTGATC nnnGCGGCAG GGATAGCTGT CGGGGTCGGG TTGCATGTAA TCTCGCATTT  GACGTGCGAC TTCCCAAGGC TCCTACACGC GAGCCCCGAG GCGTACGAGC CCATGAAGCC CTACTTCGGC GAGAAGCAGC CCCCGAACTA CTGGTGGTTC GTGAAAGGAG TGGAGGGCGT  GACGGGGATC CTGATGCTGG TTCTGATGGC GATCGCCTTC ACGCTGGCCA TGCCGTGGTT CAGGAGGAGC AAGATCAACG TGCCCGGGCC CTTGAAGAAG CTCACGGGCT TCAACGCCTT  CTGGTACTCG CACCACCTCT TCGTCATCGT CTACACGCTG CTCATCGTCC ACGGGATCAA GCTCTACCTC GCCCACGATT GGTACAAGAA GACGGTAAGC TTCCTCCTCC CTCCTTCCAA  TTACTACAAA TCTAGCCACA ATTCTTGCTT CCAATGCTAT TCTTCTCTCT TTAATCACTG TTTCTTTTGA CTATAATCGC AGACATGGAT GTACTTGGCA GTGCCGGTGA CCCTCTATGC  GTGTGAAAGG TTGATCCGGG CTTTCAGGTC CAGCATCAAG CCGGTGAAGA TTCTCAAGGT TATTATAATA TAAACCCTGA ACCAAACGGC CATATTTAAT CTGCATATTT CTGATCATCG  TCATCTGGAG CATATAATTA ACGAATAATC TATTCATTAG CCGATGAAGA TGTCATGAAT GTTGAATTAA AATTTGATGG GCATTCATGC AGGTGGCGGT TTACCCGGGG AATGTACTGG  CACTGCACAT GTCGAAGCCC CATGGGTTCA AGTACAGAAG TGGGCAGTAC ATGTTCGTAA ACTGCTCGGC TGTTTCTCCC TTTGAATGGT ATATCTATCT CTCTCTCTCT CTCATATGAC  ATTTGTGATG ATCCACGATG TTTGAGCAAT CATTGCTAGA GAAGATGCTA ACGTTTAATT ATGAGCAGGC ACCCTTTCTC GATCACTTCG TCCCCAGGAG ACGACTACCT CAGCGTCCAC  ATTCGGACAT TGGGAGATTG GACAAGGCAA CTGAAAAGCG TATTCTCGGA GGTTGGTTGG ATCGATTGAT TAATCATGGC TAGTGGGATT CATAGTTCCA GAATTTCTGC GAGCCATTTG  TTTATTGATT TGTTCTCCAT TTTATGGACT GGTAGGTATG CCAACCTCCA CCCGTCGGGA AGAGCGGACT GCTGAGAGCT GATTGCGTTC CAGGAGGAAG CATCCCACGG TAAGACTTTT  TTCCTCGGTT GCACTAGCTT CAAAGAAAAC AAACGTTTTG ATCTTGAAAT AATCAACCGA TTTTCCGAGA TATACGGTGA TCACACGGTG AGAAATTTnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn TCATCAATCA TTGTTGGAGA AGATAGTTAA  ATCATCAATT TCAAACGTGT ATTATTGAAT GTTGCATTAT CAATTTCAAA CATGTATTCC TTACCAAAAA AAAAAAAATT TTCAAACATG TATTATTGAA TGCTTAGCAG ATCCGTGATT  GATTGTCCTT TTCCCAATGC GTTACAGCTT CCCAAAGATA CTGATAGACG GTCCATACGG AGCCCCAGCA CAAGACTACC AAAAGTATGA GGTAGTGCTC CTGGTGGGGC TAGGGATCGG  CGCCACGCCC ATGGTGAGCA TCGTGAAGGA CATCATCAAC AACATAAAAG TCAAAGAAAA CGAGCAAGAC CACTTGGGCT CGTTGGAGAG TGGAGGACGA CCCGTCTCGC CACTAACCCC  GGACGACAGC AACAGCCACT ATCCCAAGGC GGGCCACAGG AGCAGCCATG GCAGAGGAGC GTTCAAGACC AGGAAGGCCT ACTTCTACTG GGTGACCCGG GAGCAGGGCT CGTTCGAGTG  GTTCAAGGGG ATCATGGATG AGGTGGCCGG GATGGACGAG CGGCAGGTCA TCGAGCTCCA CAACTACTGC ACGAGCGTGT TCGAGGAGGG CGACGCCCGG TCGGCCCTCA TCGCGATGCT  CCAGACCCTC AACCACGCGA AGCACGGGGT CGACGTCGTG TCCGGGACCC GGGTCATGTC CCACTTCGCC AAGCCCAACT GGCGCCAGGT CTACAAGAAG ATCGCGCTGC ACCACCCCGA  CAAGCGAGTT GGTGGGTCCC CGCTTAACCT AACCCCCGCG CCCGCCGTGT CTTTAGTGAT TCTGCTTGAT TCGAATGATT TGTCACATCT ATTTTTGTTA TGCATGCGTT GTTGATTTGG  CCACGATGAT CAATTTTGCA GGAGTCTTCT ATTGTGGGGC GCCGGCGTTG ACAAAGGAGT TAAATCACTT GGCTCTGGAT TTCTCTCGCA AGACATCCAC CAAGTTCGAC TTCCATAAGG 
AGAACTTT 

Retrieve as FASTA  
CDS
Send to BLAST
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CTCATCCTGT TGCCCGTTTG TCGAAACACC ATCACATGGC TTAGGAACAA GACCCGGTTG AGTGTTGCGG TCCCCTTCGA CGACAACCTG AACTTTCACA AGGTGATCnn nGCGGCAGGG  ATAGCTGTCG GGGTCGGGTT GCATGTAATC TCGCATTTGA CGTGCGACTT CCCAAGGCTC CTACACGCGA GCCCCGAGGC GTACGAGCCC ATGAAGCCCT ACTTCGGCGA GAAGCAGCCC  CCGAACTACT GGTGGTTCGT GAAAGGAGTG GAGGGCGTGA CGGGGATCCT GATGCTGGTT CTGATGGCGA TCGCCTTCAC GCTGGCCATG CCGTGGTTCA GGAGGAGCAA GATCAACGTG  CCCGGGCCCT TGAAGAAGCT CACGGGCTTC AACGCCTTCT GGTACTCGCA CCACCTCTTC GTCATCGTCT ACACGCTGCT CATCGTCCAC GGGATCAAGC TCTACCTCGC CCACGATTGG  TACAAGAAGA CGACATGGAT GTACTTGGCA GTGCCGGTGA CCCTCTATGC GTGTGAAAGG TTGATCCGGG CTTTCAGGTC CAGCATCAAG CCGGTGAAGA TTCTCAAGGT GGCGGTTTAC  CCGGGGAATG TACTGGCACT GCACATGTCG AAGCCCCATG GGTTCAAGTA CAGAAGTGGG CAGTACATGT TCGTAAACTG CTCGGCTGTT TCTCCCTTTG AATGGTATAC GTTTAATTAT  GAGCAGGCAC CCTTTCTCGA TCACTTCGCA ACTGAAAAGC GTATTCTCGG AGGTTGGTTG GATCGATTGC AACCTCCACC CGTCGGGAAG AGCGGACTGC TGAGAGCTGA TTGCGTTCCA  GGAGGAAGCA TCCCACGCTT CCCAAAGATA CTGATAGACG GTCCATACGG AGCCCCAGCA CAAGACTACC AAAAGTATGA GGTAGTGCTC CTGGTGGGGC TAGGGATCGG CGCCACGCCC  ATGGTGAGCA TCGTGAAGGA CATCATCAAC AACATAAAAG TCAAAGAAAA CGAGCAAGAC CACTTGGGCT CGTTGGAGAG TGGAGGACGA CCCGTCTCGC CACTAACCCC GGACGACAGC  AACAGCCACT ATCCCAAGGC GGGCCACAGG AGCAGCCATG GCAGAGGAGC GTTCAAGACC AGGAAGGCCT ACTTCTACTG GGTGACCCGG GAGCAGGGCT CGTTCGAGTG GTTCAAGGGG  ATCATGGATG AGGTGGCCGG GATGGACGAG CGGCAGGTCA TCGAGCTCCA CAACTACTGC ACGAGCGTGT TCGAGGAGGG CGACGCCCGG TCGGCCCTCA TCGCGATGCT CCAGACCCTC  AACCACGCGA AGCACGGGGT CGACGTCGTG TCCGGGACCC GGGTCATGTC CCACTTCGCC AAGCCCAACT GGCGCCAGGT CTACAAGAAG ATCGCGCTGC ACCACCCCGA CAAGCGAGTT 
GGTGGAGTCT TCTATTGTGG GGCGCCGGCG TTGACAAAGG AGTTAAATCA CTTGGCTCTG GATTTCTCTC GCAAGACATC CACCAAGTTC GACTTCCATA AGGAGAACTT T 

Retrieve as FASTA