Entry information : OsPrx53 (Os04g04750)
Entry ID 1063
Creation 2006-08-28 (Filippo Passardi)
Last sequence changes 2006-08-28 (Filippo Passardi)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-16 (Qiang Li)
Peroxidase information: OsPrx53 (Os04g04750)
Name (synonym) OsPrx53 (Os04g04750)
Class Class III peroxidase    [Orthogroup: Prx064]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type N/D
Inducer Glomus intraradices infection
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx53
start..stop
S start..stop
OsiPrx53 656 0 1..338 1..338
BdiPrx81 423 1e-149 5..338 2..341
OsiPrx66 407 2e-143 31..338 39..342
OsPrx66 407 6e-143 31..338 42..345
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2271936..2272127 192 N° 2 2269010..2269834 825  
complement(join(2269010..2269834,2271936..2272127))


exon

Literature and cross-references OsPrx53 (Os04g04750)
Literature REFERENCE 1. Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
REFERENCE 2. Guimil S., Chang H-S., Zhu† T., Sesma A., Osbourn A., Roux C., Ioannidis V, Oakeley E J., Docquier M., Descombes P., Briggs† S P., and Paszkowsk U. Comparative transcriptomics of rice reveals an ancient pattern of response to microbial colonization, 102 (22), 8066–8070 (2005)
Protein ref. UniProtKB:   Q7XLT4   A2XPZ4 [Incorrect splicing]   Q5U1P0 [Incorrect splicing]
DNA ref. GenBank:   NC_008397.1 (2272127..2269013)
Cluster/Prediction ref. UniGene:   Os.86533
Protein sequence: OsPrx53 (Os04g04750)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (312)
PWM (Da):   %s   35630.18 (33083.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.46 (5.06) Peptide Signal:   %s   cut: 27 range:27-338
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKLTRALAGAAVLSLCLLLAVQPAAAAGGKVESTVRKEVVKAIRADPSVGPALIRLVFHDCWVNGCDGSVLLDTTPFNSSAGVEKAAANNIGLRGFDVIDAIKAKLGDAVSCADIVVLAGRDATTILSRGRITYAVETGRKDGVVSSAAAADATLPESTFDIDQLTGNFARKNFTAEELVALAGAHAVGVSHLSSFRDRINATTETPINPRYQAALAGDVETLKGRQNATDPIEKFNIRDMDAGFRNASGFDAAGVDMAAVGVLDNSFYHANLQNMVLLRSDWELRNGTDPSLGDSLFAFRENATVWEMEFAAAMAKLSVLPAEGTRFEMRKSCRATN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, intron 1). No ESTs (NIAS DNA database and TIGR). Missing 'c'.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTTACTCGCGCGTTGGCCGGCGCCGCCGTGCTATCACTATGCTTGTTGCTCGCCGTGCAGCCGGCGGCGGCGGCCGGCGGCAAGGTGGAGAGCACGGTGAGGAAGGAGGTGGTG
AAGGCCATCAGAGCCGATCCCAGCGTTGGCCCCGCCCTCATTCGCTTGGTGTTCCACGACTGCTGGGTCAAT
GTATGTAGTGTTTCCGTTTTTCCTTTAAATTAATTTTTGGTTTGATGA
GTAATTTTCGTAAAACGCCCTATCTGTTATAGTCCAAGTTACACAAAATCACAGGAATTTTGTTATGTGGCACGTAACCTCGGGTATTATCATCCTAAAGTTTTACAAAGTCACACGATC
ATTTTGATTTTGGTTTACCACACTTTTGAGTTCTACGATCGTATCTTAAATTTATAAGGATTTCATCCATCGTATAAATGCTACGTTTGCTTTTAAATTTTGATATATGAGTATGTCAAA
ATGGTTAACGGTATCATTTGAGGAAAAATATATAATGCAAACCATAAATATAATGGAAACCTAGAAACTATCGTTAGATAAAAAAATGGACGTTTGAGATTTGTCCACGTTACCAAGGAT
AAATATTTTACTTTAATTCATGATTAAATGTAGGAGTGAACTTTTACTCTTAGTGACATAGACATATCTCAGATTTCATATTTGGATCCAATGGTGGTTTTTATATTCCCAGTGCATATG
TAGTTCACACTACATATTTTCCCTGGTTTTGTGAAACTTTAGGATCATAGTATTAGGGGTTATGTAATATGTGTTAAAATTCTTATGGTTTTTGTGTAACTTAAACCATAATATGTGGAG
TTTTATGAACTATAATTTTAGTTATATATGCCTATGAACCTCAAGCATATGCTTAGGTACATTATAATTGTTTTCATATTCGTACGGTTCACTGAATTATATAGCTTTTCTTTTCAAGTA
GCTTGATGGATGCATTGTTGTTTCACGTGATTAAAATGATAAAGAAAATGTGAGTTCTTCAGTTTTGGTTGATAAATGACTTGCACTAATCCTAGAAATGCAACGATAAACAGTGGTGGA
GCGCAATTAGGTCTTGTTTTTTTCTCCAACAAGAGTTGGATTAAGATTAAGATTTTCGTGATACGCTTTTCAAACTACTATACGGTGTGTTTCGTGCAAGTACTTTATATATGAAAGTTG
GTCTAAAATATCATATTAATCTATTTTTCAAGTTTGTAATAATTAAAACTTAATCAATCATACGTTAATACCACCTCGTCTTGCGTAAAAAACTTAATTTTTATCTTCATCTTCAGGACA
AAAGAACAGCACCTTAGTTTGTTTTAGCGTTTGTCATGGATGAATATGACACATCATGCAATCGAGAAAGCATATGCATGAGTTTTCTGGTTTAGAGCAAACCGGCCCATTCTCATAGAT
GGGCCGAAAATCTGACCTAAATTAATTTATGGCCCATCCATAGTTTGCTTAACAACACAGTTTATCTCTACTATATATATATTAAAAGCAGATATATCCCCTTTCCATTTCCCTCCTAAC
ATGCACAGCGTGTGCTTGTACGCAAAAAACAACCATTGTCGCTACATAATTATGTGTGTTTGGTCTAGTGATTACAATTTCGGTCCGAAATTTAAGAAATTTTAGACCCGTGCAAGTCAC
TATATCTCGACCGAAATTTTTCTATATTTGGTCAAAATTTAATCAAATTCAATTACATTGTGTTAAAATTTTAGAAAAGTGCCTAAAATCCCGAAATTTCGGTTCTACCGAAACTAAGAT
GGATTTGCTGAAAAAGTGTCGCCACATTATGTGGCTGAGTACAGTCGAATTTTAACGGCTGGGATGCACTGCGCTGGACATCGTGTGCACGATGCACATCCGTTTCTCCACCTGTTTATC
CCTTTGCAATTTTTTTACTTTATTTGTTGATCCGGAATTGCTATGGGTTTGTAGCAGTCAATTTTGTTGTTGTAATTATGTATTTATACAAATTTACATACTAGTTACACTCCACTTACA
CATCACTTACATATGTAATTTTAAGACCTATATATGTAATTATATGTAATTTTAGGACTTACATTGTAAATATACTAAAATTACATATGTAATTTAGAGATTTACAATGTAAATACATAC
CGACTATTTTTTGATGAAAAATATGACGCCATAAATATAGCTAGTAGATCCCTGCTTTAGTCTATTTTTAAATATATATAGGTCTAACTCGTTACAATATACATGCATATAACTAGCGTA
ATGAAAAATGCAGGGATGTGACGGGTCCGTGCTCTTGGACACGACGCCGTTCAACAGCAGCGCCGGCGTCGAGAAGGCGGCGGCGAACAACATCGGCCTCCGCGGCTTCGACGTGATCGA
CGCCATCAAGGCCAAGCTCGGCGACGCCGTCTCCTGCGCCGACATTGTCGTGCTCGCCGGGCGCGACGCCACCACCATCCTGAGCCGCGGCAGGATCACCTACGCCGTCGAGACCGGCCG
CAAGGACGGCGTCGTGTCGTCCGCCGCCGCCGCCGACGCCACCCTCCCGGAGTCCACCTTCGACATCGACCAGCTCACGGGCAACTTCGCCCGGAAGAACTTCACCGCGGAGGAGCTCGT
CGCCCTCGCCGGCGCGCACGCCGTCGGCGTCAGCCACCTCTCCTCCTTCCGCGACCGCATCAACGCCACCACCGAGACCCCGATCAACCCGAGGTACCAGGCGGCGCTCGCCGGCGACGT
CGAGACCCTGAAGGGGCGGCAGAACGCGACGGACCCAATCGAGAAGTTCAACATCCGCGACATGGACGCCGGGTTCCGGAACGCGTCGGGGTTCGACGCCGCCGGCGTGGACATGGCGGC
TGTGGGCGTGCTCGACAACAGCTTCTACCACGCCAACCTGCAGAACATGGTGCTGCTCAGGTCCGACTGGGAGCTGAGGAATGGCACCGATCCGTCGCTCGGCGACAGCCTGTTCGCGTT
CAGGGAGAACGCCACCGTGTGGGAGATGGAGTTCGCCGCCGCCATGGCCAAGCTCAGCGTGCTCCCCGCGGAGGGGACCCGTTTCGAGATGAGGAAGAGCTGCAGGGCTACCAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTTACTCGCGCGTTGGCCGGCGCCGCCGTGCTATCACTATGCTTGTTGCTCGCCGTGCAGCCGGCGGCGGCGGCCGGCGGCAAGGTGGAGAGCACGGTGAGGAAGGAGGTGGTG
AAGGCCATCAGAGCCGATCCCAGCGTTGGCCCCGCCCTCATTCGCTTGGTGTTCCACGACTGCTGGGTCAAT
GGATGTGACGGGTCCGTGCTCTTGGACACGACGCCGTTCAACAGCAGC
GCCGGCGTCGAGAAGGCGGCGGCGAACAACATCGGCCTCCGCGGCTTCGACGTGATCGACGCCATCAAGGCCAAGCTCGGCGACGCCGTCTCCTGCGCCGACATTGTCGTGCTCGCCGGG
CGCGACGCCACCACCATCCTGAGCCGCGGCAGGATCACCTACGCCGTCGAGACCGGCCGCAAGGACGGCGTCGTGTCGTCCGCCGCCGCCGCCGACGCCACCCTCCCGGAGTCCACCTTC
GACATCGACCAGCTCACGGGCAACTTCGCCCGGAAGAACTTCACCGCGGAGGAGCTCGTCGCCCTCGCCGGCGCGCACGCCGTCGGCGTCAGCCACCTCTCCTCCTTCCGCGACCGCATC
AACGCCACCACCGAGACCCCGATCAACCCGAGGTACCAGGCGGCGCTCGCCGGCGACGTCGAGACCCTGAAGGGGCGGCAGAACGCGACGGACCCAATCGAGAAGTTCAACATCCGCGAC
ATGGACGCCGGGTTCCGGAACGCGTCGGGGTTCGACGCCGCCGGCGTGGACATGGCGGCTGTGGGCGTGCTCGACAACAGCTTCTACCACGCCAACCTGCAGAACATGGTGCTGCTCAGG
TCCGACTGGGAGCTGAGGAATGGCACCGATCCGTCGCTCGGCGACAGCCTGTTCGCGTTCAGGGAGAACGCCACCGTGTGGGAGATGGAGTTCGCCGCCGCCATGGCCAAGCTCAGCGTG
CTCCCCGCGGAGGGGACCCGTTTCGAGATGAGGAAGAGCTGCAGGGCTACCAACTAA

Retrieve as FASTA