Entry information : OsPrx54 (Os04g34630)
Entry ID 1064
Creation 2006-07-25 (Filippo Passardi)
Last sequence changes 2006-07-25 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-12-21 (Christophe Dunand)
Peroxidase information: OsPrx54 (Os04g34630)
Name (synonym) OsPrx54 (Os04g34630)
Class Class III peroxidase    [Orthogroup: Prx128]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx54
start..stop
S start..stop
ZmPrx19 560 0 3..345 2..340
SiPrx12 555 0 40..344 41..344
BdiPrx128 547 0 5..343 3..330
ZmPrx83 545 0 40..344 45..348
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20963362..20964399 1038  
join(20963362..20964399)


exon

Literature and cross-references OsPrx54 (Os04g34630)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q7F936
DNA ref. GenBank:   NC_008397.1 (20963362..20964396)
Protein sequence: OsPrx54 (Os04g34630)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345
PWM (Da):   %s   37004.4 Transmb domain:   %s   i7-29o
PI (pH):   %s   7.18
Sequence
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Send to Peroxiscan
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MAATLRWGGG GLAVAAFAAV VALSGLLGVA ANYGGGGGFL FPQFYQHTCP QMEAVVGGIV ARAHAEDPRM AASLLRMHFH DCFVQGCDAS VLLDADGSGR FATEKRSNPN RDSLRGYEVI  DEIKAALEHA CPRTVSCADI VAVAARDSTA LTGGPWWEVP LGRRDSLTAS LSGSNNLIPA PNDTLPTIVG KFRNQGLDVV DLVALSGGHT IGNSRCVSFR QRLYGQLNSD GKPDFTLNPA 
YAAELRERCP SSGGDQNLFA LDPASQFRFD NQYYRNILAM NGLLSSDEVL LTKSRETMEL VHRYAASNEL FFAQFAKSMV KMGSISPLTG HNGEIRMNCR RVNHF 

Retrieve as FASTA  
Remarks chromosome 4. 3 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGA CATTGCGTTG GGGCGGCGGC GGGCTCGCGG TGGCGGCGTT TGCGGCGGTG GTCGCGTTGT CCGGCCTCCT CGGCGTCGCG GCGAACTACG GCGGCGGCGG CGGGTTCTTG  TTCCCGCAGT TCTATCAGCA CACGTGCCCG CAGATGGAGG CGGTGGTGGG CGGCATCGTG GCGAGGGCGC ACGCCGAGGA CCCGCGCATG GCGGCGTCGC TGCTGCGGAT GCACTTCCAC  GACTGCTTCG TGCAGGGGTG CGACGCGTCG GTGCTGCTCG ACGCCGACGG CAGCGGGCGG TTCGCCACGG AGAAGCGGTC CAACCCCAAC CGCGACTCGC TGCGCGGGTA CGAGGTGATC  GACGAGATCA AGGCCGCCCT GGAGCACGCG TGCCCGCGCA CCGTCTCCTG CGCCGACATC GTCGCCGTCG CCGCCAGGGA CTCCACCGCG CTCACCGGCG GGCCGTGGTG GGAGGTGCCC  CTCGGCAGGC GGGACTCGCT GACGGCCAGC CTGAGCGGCT CCAACAACCT CATCCCGGCG CCCAACGACA CGCTCCCCAC CATCGTCGGC AAGTTCCGCA ACCAGGGCCT CGACGTCGTC  GACCTCGTCG CGCTCTCCGG CGGCCACACC ATCGGCAACT CCCGGTGCGT CAGCTTCCGC CAGAGGCTGT ACGGCCAGCT GAACAGCGAC GGGAAGCCGG ACTTCACCCT GAACCCGGCG  TACGCGGCGG AGCTCCGGGA GCGGTGCCCG AGCTCCGGCG GCGACCAGAA CCTGTTCGCG CTGGACCCGG CCAGCCAGTT CCGGTTCGAC AATCAGTACT ACCGCAACAT CCTCGCCATG  AACGGCCTCC TCAGCTCCGA CGAGGTGCTC CTCACCAAGA GCCGGGAGAC GATGGAGCTC GTCCACCGCT ACGCCGCCAG CAACGAGCTC TTCTTCGCGC AGTTCGCCAA GTCCATGGTC 
AAGATGGGCA GCATCTCCCC GCTCACCGGC CACAACGGCG AGATCAGGAT GAACTGCAGG AGGGTCAACC ACTTCTAG 

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CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGA CATTGCGTTG GGGCGGCGGC GGGCTCGCGG TGGCGGCGTT TGCGGCGGTG GTCGCGTTGT CCGGCCTCCT CGGCGTCGCG GCGAACTACG GCGGCGGCGG CGGGTTCTTG  TTCCCGCAGT TCTATCAGCA CACGTGCCCG CAGATGGAGG CGGTGGTGGG CGGCATCGTG GCGAGGGCGC ACGCCGAGGA CCCGCGCATG GCGGCGTCGC TGCTGCGGAT GCACTTCCAC  GACTGCTTCG TGCAGGGGTG CGACGCGTCG GTGCTGCTCG ACGCCGACGG CAGCGGGCGG TTCGCCACGG AGAAGCGGTC CAACCCCAAC CGCGACTCGC TGCGCGGGTA CGAGGTGATC  GACGAGATCA AGGCCGCCCT GGAGCACGCG TGCCCGCGCA CCGTCTCCTG CGCCGACATC GTCGCCGTCG CCGCCAGGGA CTCCACCGCG CTCACCGGCG GGCCGTGGTG GGAGGTGCCC  CTCGGCAGGC GGGACTCGCT GACGGCCAGC CTGAGCGGCT CCAACAACCT CATCCCGGCG CCCAACGACA CGCTCCCCAC CATCGTCGGC AAGTTCCGCA ACCAGGGCCT CGACGTCGTC  GACCTCGTCG CGCTCTCCGG CGGCCACACC ATCGGCAACT CCCGGTGCGT CAGCTTCCGC CAGAGGCTGT ACGGCCAGCT GAACAGCGAC GGGAAGCCGG ACTTCACCCT GAACCCGGCG  TACGCGGCGG AGCTCCGGGA GCGGTGCCCG AGCTCCGGCG GCGACCAGAA CCTGTTCGCG CTGGACCCGG CCAGCCAGTT CCGGTTCGAC AATCAGTACT ACCGCAACAT CCTCGCCATG  AACGGCCTCC TCAGCTCCGA CGAGGTGCTC CTCACCAAGA GCCGGGAGAC GATGGAGCTC GTCCACCGCT ACGCCGCCAG CAACGAGCTC TTCTTCGCGC AGTTCGCCAA GTCCATGGTC 
AAGATGGGCA GCATCTCCCC GCTCACCGGC CACAACGGCG AGATCAGGAT GAACTGCAGG AGGGTCAACC ACTTCTAG 

Retrieve as FASTA