Entry information : OsPrx56 (Os04g53640)
Entry ID 1066
Creation 2006-07-25 (Filippo Passardi)
Last sequence changes 2006-07-25 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-12-21 (Christophe Dunand)
Peroxidase information: OsPrx56 (Os04g53640)
Name (synonym) OsPrx56 (Os04g53640)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type N/D
Inducer Acid treatment
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx56
start..stop
S start..stop
BdiPrx132 598 0 1..328 1..328
SiPrx50 547 0 1..328 1..347
SbPrx94 546 0 1..328 4..347
ZmPrx140 528 0 1..328 1..352
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 32004823..32005038 216 N° 2 32005127..32005315 189 N° 3 32005538..32005706 169 N° 4 32006328..32006740 413
join(32004823..32005038,32005127..32005315,32005538..32005706,32006328..32006740 )


exon

Literature and cross-references OsPrx56 (Os04g53640)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q5U1N7
DNA ref. GenBank:   NC_008397.1 (32004823..32006737)
Protein sequence: OsPrx56 (Os04g53640)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (306)
PWM (Da):   %s   36125.29 (33601.9)  
PI (pH):   %s   8.38 (8.20) Peptide Signal:   %s   cut: 23 range:23-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPYRLLFGFVLSLVLQFSLVLSNPPGLNIGFYQYTCPKAEVIVRDEMTKIISRVPSLAGPLLRMHFHDCFVNGCDGSILLDSTPGSPSEKESIPNLSLRGFGTIDRVKAKLEQACPGVVSCADILALVARDVVFLTKGPHWEVPTGRRDGTRSVKDDAVNNLPPPFFDATRNLYQFFIPKGLDAKDQVVLLGGHTLGTSHCSSFASRLYNFSGMMMADPTLDKYYVPRLKSKCQPGDKTTLVEMDPGSFRTFDTSYYRHIARGRALFTSDETLMLDPFTRGYILRQAGVAGYPAEFFADFAASMVKMGNMQVLTGAQGEIRKHCAFVN

Retrieve as FASTA  
Remarks chromosome 4. No ESTs. TC284038
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAG
GTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAAT
GTATGCATACTGCTTACCATGCTC
TGAGCTGTTTTGATTTTGAATTGAGTTTATCCTACTAAGCTATGTGCCTCTATGTGTTTTGCAGGGTTGCGATGGCTCTATACTTCTGGATAGCACACCAGGATCACCATCTGAGAAGGA
ATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCCTGTGCTGATATCCTTGCTCTGGTAGCCAGAGA
TGTTGTCTTCTTG
GTAAGAACTAGCTTCCATGTTCATTAATCTTAGTTCATTCTTTAGTTAGAAAAGTTAGTATAGTTTGGCTAAGTGGTGAGAATTGGCTGTTTTAGGCCGACAATAGT
GGAAAACCACACAGTTTGATTTTCACCATATTCTACGTGGCTATTGGATTTCTTGCTGCTTACAGTAACTAGAACTATAGTTGAGAAAAGTCCCTATTCTTCCCTTGTGCAACAGACCAA
AGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAACAACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAATTCTT
CATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAG
GTATATACTATTCTTCACTAACTTCAATGTTTAATCTTCATAGACTAGCTCCCTAGATGATTTATACTGTACTTAC
TGAAAGTTGCAACTCTCGGTTCTGTTGCCTGTGCTCCTTTTAAACACTCTGCTGATCCCGATATATCCCAGTAGCATTCTCCAATAAAGGTGATCACTTATTTAATTACTATACAACTTG
TTAATAAAGGAAGGTATCATATGCGCATACCAAGTCAACAAAATGGGAAGTACAAAACTATGTGGTTCTTAGTTCTAATCACATGGCACAGTACAGAACCAAGCCAGGAGACCAAGACCA
CTTTATCCTCAAACACAGCATAGCTCTTTATTCGAGTGGTCAAAACATCGTTTCCTGTTCAGCACCATACTCATTTGTGCACTTGCAAAATTCATGGTTTTAAATAGCGGGTTAAGATAT
TTAGCGATTGACCTTCTCAAACAGCTATAGCGAACTTAATGGAGCTATAGTGGCTAAGACTCTTCTCAAACAGCTATAGCCAGAGATTCAAAACCATGGCAAAATTGCAATCCAAACTTG
TTTAATTACCAAGAACTCATCACAAATGTGCATATGCAATTTGAGAAGTGACACATTGTTCACAGGTGGGCACACTCTTGGAACCTCCCATTGTTCATCCTTCGCCAGCCGGCTGTACAA
CTTCAGCGGCATGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAG
GACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGGGGCTACATCCTCCGCCAGGCCGGCGTCGC
CGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATCAGGAAGCACTGTGCCTTTGTGAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAG
GTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAAT
GGTTGCGATGGCTCTATACTTCTG
GATAGCACACCAGGATCACCATCTGAGAAGGAATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCC
TGTGCTGATATCCTTGCTCTGGTAGCCAGAGATGTTGTCTTCTTG
ACCAAAGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAAC
AACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAATTCTTCATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAG
GTGGGCACACTCTTGGAACCTCCCAT
TGTTCATCCTTCGCCAGCCGGCTGTACAACTTCAGCGGCATGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACG
CTGGTGGAGATGGACCCGGGGAGCTTCAGGACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGG
GGCTACATCCTCCGCCAGGCCGGCGTCGCCGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATC
AGGAAGCACTGTGCCTTTGTGAATTAG

Retrieve as FASTA