Entry information : JcPrx01 ( JcCB0981141.10)
Entry ID 10689
Creation 2012-03-05 (Qiang Li)
Last sequence changes 2016-04-01 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-04-01 (Achraf Jemmat)
Peroxidase information: JcPrx01 ( JcCB0981141.10)
Name (synonym) JcPrx01 ( JcCB0981141.10)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Jatropha
Organism Jatropha curcas    [TaxId: 180498 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value JcPrx01
start..stop
S start..stop
RcPrx14 565 0 4..334 8..339
MePrx124 564 0 5..334 10..340
PtPrx37 563 0 4..332 8..336
PpePrx77 514 0 4..334 13..343
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..237 237 N° 2 587..766 180 N° 3 1325..1484 160 N° 4 1702..2129 428
join(1..237,587..766,1325..1484,1702..2129)


exon

Literature and cross-references JcPrx01 ( JcCB0981141.10)
DNA ref. GenBank:   NW_012124112.1 (506349..508477)
Cluster/Prediction ref. Genebank:   105628424
Protein sequence: JcPrx01 ( JcCB0981141.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (312)
PWM (Da):   %s   37214.93 (34833.7) Transmb domain:   %s   i5-27o
PI (pH):   %s   8.61 (8.71) Peptide Signal:   %s   cut: 23 range:23-334
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRGVFFSLLVVVLSFCVANVEAAITLQPPVKLRWHYYERNTTCRDAEEYVRHQVTLFWNKDKTITAKLLRLLYSDCFVTGCDASILLDGPNSERTAPQNWGLGGFVIIDKIKEVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRKDGMTSKAASVDLPSPSISLTDALAYFKSRGLDDLDFVTLLGAHSMGKTHCRFVVDRLYDFNNTGKPDPNMEPAFAKELRKQCPRRTKKGQTDPLGFLNPDSGSNYKFTESFYKRALSYKSVLGVDQQLLFSNDTLQITQEFAASFEDLRRSFALSMNRMGNINVLTGNAGEIRKNCRTTNKK

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from kazusa (Big 3' end is missing due to the ending of contig). Containing motif 'YSDC'.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAGGAGTATTTTTCTCATTACTAGTTGTTGTATTAAGCTTTTGTGTAGCAAATGTGGAGGCAGCCATCACGCTGCAACCGCCGGTGAAGCTCCGGTGGCATTATTACGAGCGGAAC
ACTACATGCCGTGACGCGGAGGAGTACGTAAGGCATCAAGTAACGTTGTTTTGGAATAAAGATAAAACCATTACTGCTAAACTCCTCCGGTTGCTCTACTCAGATTGCTTTGTAACT
GTA
TGTCTTTCAATTTTTTTTTTTTTATTCTCTACTCAGTTTCATCCATAAACGTTTTGTTTCTTTAGATGAATTTTTTTTTTTTTTTTATCAAAGGTTGCATGTAAAAAACCATTTAACAAA
TAAAAGTTTTACTCGTGCTTATTTTTGGTTAAAATTACTTGTTTGTTGAACAAAATAATTGCATATTGTTTCCACTTCAGGTCTATGTTTCACATAAGCAAATGCTTATCAAGCTTATAT
CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGCCATAGTTCTTCTACTGCTAACTCTTTGAAAAAATTGGAAAAAAAAAAAAAAAAAAAAACAGGGGTGTGATGCATC
AATTCTTCTTGATGGACCAAATTCAGAAAGGACTGCACCACAAAATTGGGGACTAGGTGGATTTGTAATCATAGACAAGATCAAAGAGGTTCTTGAACAACGGTGCCCTGGAGTCGTCTC
TTGTGCTGACATTCTCAACCTTGCTACCAGAGATGCTGTTCATTTG
GTAAGATTTTACAAATCCTACCTTTACTATTACTTTTTTTTTTATAACCGAAAAATGTAATTTCTCTCAAATCA
TAGAGTATAAAAGTTTTTGGTCCAAACAGCAAAGTGTGTTTCCCGAGGATCGAATTTGTGTTCTCACAATTACAGGGATTGAGGTTACTAACCACTCCAACTAATACCTTATTTATTTAC
CTTTACTATTATTATTATTATTACTTCTACTTTCTAACCTATAAGCATTATAATCTCTTTCGATCTTAATTCCACTATAATAATAGTTCACAACAAACTCCTAAAGGTCATCAGAATTTG
TTCTTAAAGTAAAATTCACATGTTCTATTTGTAAAAACGTCGAAAAAGTTAAAATCCAAGTAACACAAATGAGTCTCTCAACAATTTTACTAAGAATCGTTTATCTAATACCTACTTTGC
AGTAGAGCTCATCAAGATTTATATTACTATCTGTTGAAAAGAAAGAAAAAAAAAAAGTATAACTCTGATGGATTAATCAACTCCTAATAGCATCTATGATTACTGATCCAATGAACCACA
ACAGGCAGGTGCACCATCTTATCCTGTATTCACAGGCAGAAAGGATGGGATGACATCAAAAGCTGCATCAGTAGACCTCCCATCACCATCCATCTCATTGACAGATGCATTGGCATACTT
CAAATCTAGAGGCTTAGATGATCTAGATTTCGTAACTCTCCTAG
GTATGAATCTTAATCACCAGAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAAAAAAAATAATATATATATATATATATATATATATATATATATATATATATATATATACCAAAGAAACTAATCTGCATAATAATAGCTGCCCACCTTATGTCCTCATGTGTAT
TTTTGTGTTTCTGTGTATCAGGGGCACACTCAATGGGTAAAACACACTGTCGTTTTGTTGTGGACCGTTTGTACGATTTCAATAATACAGGAAAGCCAGACCCAAACATGGAACCAGCAT
TTGCAAAAGAATTGAGAAAGCAATGTCCAAGAAGAACAAAAAAGGGCCAAACTGATCCTCTGGGGTTTCTAAACCCTGATTCTGGCTCTAACTACAAATTTACAGAGTCCTTCTACAAGA
GGGCATTGTCCTACAAATCTGTACTTGGAGTTGATCAGCAGTTGCTATTCAGTAACGACACACTACAGATCACACAAGAATTTGCTGCCAGTTTTGAAGACTTACGGAGGTCATTTGCAC
TGTCAATGAATCGGATGGGAAACATCAATGTTCTAACAGGAAATGCAGGCGAGATTCGCAAAAATTGCCGGACCACAAATAAGAAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAGGAGTATTTTTCTCATTACTAGTTGTTGTATTAAGCTTTTGTGTAGCAAATGTGGAGGCAGCCATCACGCTGCAACCGCCGGTGAAGCTCCGGTGGCATTATTACGAGCGGAAC
ACTACATGCCGTGACGCGGAGGAGTACGTAAGGCATCAAGTAACGTTGTTTTGGAATAAAGATAAAACCATTACTGCTAAACTCCTCCGGTTGCTCTACTCAGATTGCTTTGTAACT
GGG
TGTGATGCATCAATTCTTCTTGATGGACCAAATTCAGAAAGGACTGCACCACAAAATTGGGGACTAGGTGGATTTGTAATCATAGACAAGATCAAAGAGGTTCTTGAACAACGGTGCCCT
GGAGTCGTCTCTTGTGCTGACATTCTCAACCTTGCTACCAGAGATGCTGTTCATTTG
GCAGGTGCACCATCTTATCCTGTATTCACAGGCAGAAAGGATGGGATGACATCAAAAGCTGCA
TCAGTAGACCTCCCATCACCATCCATCTCATTGACAGATGCATTGGCATACTTCAAATCTAGAGGCTTAGATGATCTAGATTTCGTAACTCTCCTAG
GGGCACACTCAATGGGTAAAACA
CACTGTCGTTTTGTTGTGGACCGTTTGTACGATTTCAATAATACAGGAAAGCCAGACCCAAACATGGAACCAGCATTTGCAAAAGAATTGAGAAAGCAATGTCCAAGAAGAACAAAAAAG
GGCCAAACTGATCCTCTGGGGTTTCTAAACCCTGATTCTGGCTCTAACTACAAATTTACAGAGTCCTTCTACAAGAGGGCATTGTCCTACAAATCTGTACTTGGAGTTGATCAGCAGTTG
CTATTCAGTAACGACACACTACAGATCACACAAGAATTTGCTGCCAGTTTTGAAGACTTACGGAGGTCATTTGCACTGTCAATGAATCGGATGGGAAACATCAATGTTCTAACAGGAAAT
GCAGGCGAGATTCGCAAAAATTGCCGGACCACAAATAAGAAATAA

Retrieve as FASTA