Entry information : ArubGPx02
Entry ID 10763
Creation 2012-03-16 (Christophe Dunand)
Last sequence changes 2012-04-23 (Catherine Mathe (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-23 (Christophe Dunand)
Peroxidase information: ArubGPx02
Name ArubGPx02
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Ascoideaceae Ascoidea
Organism Ascoidea rubescens    [TaxId: 54195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ArubGPx02
start..stop
S start..stop
SkluGPx01 136 3e-41 1..174 1..170
SpaGPx01 135 6e-41 12..174 2..160
ClusGPx02 134 8e-41 15..174 1..156
ScaGPx02 134 9e-41 14..174 3..159
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 611019..611609 591  
join(611019..611609)


exon

Literature and cross-references ArubGPx02
DNA ref. JGI genome:   scaffold_3 (611019..611609)
Cluster/Prediction ref. JGI gene:   32149
Protein sequence: ArubGPx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196
PWM (Da):   %s   22698.84  
PI (pH):   %s   9.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MISRVSSFFN NSYSLYDFTV EDCYGNIFDF SKLEDKVILI VNITIIDAFL EKIFELQTLY DKYNKDGLEI IAFPTDQFLS PSLTNPQTLP SNSVSNFCQK YNITFPVMEK CKVNGKNQVG 
VYRYLKAQKK GPLGLKLIKW NFEKFLIDKD GEVSGRFSSL YRLNKLEKNI KSLLFDKKKP RSVSSRTLNK YSNYYY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATAAGCA GAGTATCATC ATTTTTCAAT AATTCATATT CATTATACGA TTTTACAGTG GAGGATTGTT ATGGAAATAT CTTTGATTTT TCAAAGCTTG AGGATAAAGT CATACTAATA  GTGAATATAA CTATAATCGA TGCATTTTTG GAAAAGATTT TCGAATTGCA AACATTATAT GATAAATATA ACAAAGATGG GTTGGAAATT ATTGCTTTTC CTACAGACCA GTTTCTTTCA  CCATCGTTAA CAAACCCACA AACACTGCCC AGTAATTCAG TGTCGAATTT CTGTCAAAAA TATAATATAA CGTTTCCTGT GATGGAAAAA TGTAAAGTCA ATGGTAAAAA TCAAGTTGGT  GTGTATAGAT ATTTGAAAGC TCAGAAAAAA GGCCCCTTGG GATTGAAATT GATCAAATGG AATTTTGAAA AATTTTTAAT TGATAAAGAT GGCGAGGTCT CTGGGAGATT CAGCTCGCTT 
TACAGGCTAA ATAAGTTGGA GAAAAACATT AAAAGCTTGT TGTTTGATAA AAAAAAGCCT CGAAGCGTTT CAAGCAGAAC ATTGAATAAA TATAGCAATT ACTATTACTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATAAGCA GAGTATCATC ATTTTTCAAT AATTCATATT CATTATACGA TTTTACAGTG GAGGATTGTT ATGGAAATAT CTTTGATTTT TCAAAGCTTG AGGATAAAGT CATACTAATA  GTGAATATAA CTATAATCGA TGCATTTTTG GAAAAGATTT TCGAATTGCA AACATTATAT GATAAATATA ACAAAGATGG GTTGGAAATT ATTGCTTTTC CTACAGACCA GTTTCTTTCA  CCATCGTTAA CAAACCCACA AACACTGCCC AGTAATTCAG TGTCGAATTT CTGTCAAAAA TATAATATAA CGTTTCCTGT GATGGAAAAA TGTAAAGTCA ATGGTAAAAA TCAAGTTGGT  GTGTATAGAT ATTTGAAAGC TCAGAAAAAA GGCCCCTTGG GATTGAAATT GATCAAATGG AATTTTGAAA AATTTTTAAT TGATAAAGAT GGCGAGGTCT CTGGGAGATT CAGCTCGCTT 
TACAGGCTAA ATAAGTTGGA GAAAAACATT AAAAGCTTGT TGTTTGATAA AAAAAAGCCT CGAAGCGTTT CAAGCAGAAC ATTGAATAAA TATAGCAATT ACTATTACTA A 

Retrieve as FASTA