Entry information : ArubGPx01
Entry ID 10764
Creation 2012-03-16 (Christophe Dunand)
Last sequence changes 2012-05-21 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-16 (Christophe Dunand)
Peroxidase information: ArubGPx01
Name ArubGPx01
Class Other glutathione peroxidase    [Orthogroup: Gpx4001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Ascoideaceae Ascoidea
Organism Ascoidea rubescens    [TaxId: 54195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ArubGPx01
start..stop
S start..stop
PangGPx01 120 1e-34 38..204 2..161
SmiGPx03 119 1e-34 36..204 1..162
SkuGPx01 116 3e-33 36..204 1..162
ClusGPx01 115 5e-33 38..203 2..160
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 613214..613220 7 N° 2 614196..614529 334 N° 3 614590..614911 322  
join(613214..613220,614196..614529,614590..614911)


exon

Literature and cross-references ArubGPx01
DNA ref. JGI genome:   scaffold_3 (613214..614911)
Cluster/Prediction ref. JGI gene:   69202 [Incorrect prediction]
Protein sequence: ArubGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   220
PWM (Da):   %s   25176.08  
PI (pH):   %s   6.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
METQDVFAGDLVPVLTQDSHLITNGLKPSPSSKEAIGSYFYQLKAEDSAGNIFDFANLRNQVVLVINISGNAYSNQTSLSKYHFTVLEKLYQKYHLNPITGEPQFEIIAFPCDHPVEADSQLREYLAKNYNITFPLLRRIKVNGKYASDIYKFLKNEKNGVFGKSIKWNFEKFVIDKYGNVIKRSTFLKNLKLIEDKIFNLIEEDIVIDKCYPLPDDFLL

Retrieve as FASTA  
Remarks Complete sequence from genomic (2 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAAGTAAATTATTACGCTCTTCTAATTTATCATCCTCAAAAGCAGGTTTTAATTTTTATAATTTTAGAGATTTACCAAGAGAGGCCTTTATTTCTTCCTCTTCCTCAATTAAGATT
CCCAGATTTCAGTTGTCTAACCCCAATACAAATTCAACTTCGAATTATGAAAATAAATTTCGAGATGATATAAAATTGCCGGAATACGCCGATGATAATAACCACAACCACACCGTTACC
ACAACCACTACTAATAATAATAACAATAGCAATAATAGTGACAAAATAATTTATTCTCCTAATTCTCAAGTCTCCATTTTATATCCAACAAATAGTAATGAAAGTTATCTTTCCGATACT
TTTTCATTTGAAGTTGGCAATTCTGATAGCAATGAAATGAATTCAAATGACAAATCTTTTAATAATTATGACAACAATTACCAAACTTATATTAATAGTCAAAGCACTGTTAAAAATCTT
TTTAACAACCATGGCAATCATGAGAATATGAATAATAAAGATAATAACAATCACAATCACAATAATAATTATTTTCATATTAATAATAACGATAATGAATCTATTTTCTCTTCAAATTCA
TTATCAACTTATACCAATGGGAAAAGGACCCAAAATTTTTACCCATTCTTTCCTAATAAATCAACCAGTAGAAATATAAATAAACTATCACTTGATATGAATAATATCTCAAACAATAAA
TCGGCTCAAAATTTATTAGATAATCAATCCTTGAATCCAAAAAAAAAGAAGAAAACTTTGGAAATTACAGAAAAAGTTTTTTCTCCAAACTCTACAACTTCAGCCTTCTCAAATAATAAT
AATAATAATAATAATAGTAATAATAATAGTAATAATAATAATAATAATAATAATGGTAAAATAGATTGCAAAAACTTTTATAGTCAACCAAATTCATCAACTTTTTCAAGTTTTTCGACT
ACTTATAACTATACTATTCCAGCTCAAGATGTCTTTGCAGGGGATTTGGTTCCAGTACTTACTCAGGATTCACATTTGATTACAAATGGATTAAAACCTTCCCCTTCTTCAAAAGAGGCA
ATTGGATCATATTTCTATCAATTAAAAGCTGAAGACTCGGCTGGAAACATCTTTGATTTTGCCAATTTGAGAAACCAAGTTGTTTTGGTTATCAACATCTCAGGTAACGCATATTCCAAT
CAAACCAGTCTCTCAAAGTACCATTTCACAGTGTTAGAAAAGTTGTACCAAAAATATCATTTAAACCCAATAACTGGCGAGCCCCAATTTGAGATCATTGCCTTTCCATGCGATCA
GTTT
TTTGCACCATTTTTAGCCTTGAAAAATACTGATAACGATGGGAATAAAGTTGAGAGTCCAGTTGAAGCCGATAGCCAGCTTAGAGAATATTTGGCTAAAAACTATAATATCACATTTCCA
TTGCTTCGCAGAATTAAGGTCAATGGGAAATATGCAAGCGATATATACAAGTTCTTGAAAAATGAGAAAAATGGTGTATTTGGAAAGTCAATCAAGTGGAATTTTGAAAAATTTGTCATT
GACAAGTATGGAAATGTGATAAAAAGATCTACTTTTCTCAAGAATTTGAAGCTGATTGAGGACAAAATATTCAATTTAATCGAGGAAGACATTGTTATAGACAAATGCTATCCTCTTCCC
GATGATTTTTTGTTATAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAACTCAAGATGTCTTTGCAGGGGATTTGGTTCCAGTACTTACTCAGGATTCACATTTGATTACAAATGGATTAAAACCTTCCCCTTCTTCAAAAGAGGCAATTGGATCATATTTC
TATCAATTAAAAGCTGAAGACTCGGCTGGAAACATCTTTGATTTTGCCAATTTGAGAAACCAAGTTGTTTTGGTTATCAACATCTCAGGTAACGCATATTCCAATCAAACCAGTCTCTCA
AAGTACCATTTCACAGTGTTAGAAAAGTTGTACCAAAAATATCATTTAAACCCAATAACTGGCGAGCCCCAATTTGAGATCATTGCCTTTCCATGCGATCA
TCCAGTTGAAGCCGATAGC
CAGCTTAGAGAATATTTGGCTAAAAACTATAATATCACATTTCCATTGCTTCGCAGAATTAAGGTCAATGGGAAATATGCAAGCGATATATACAAGTTCTTGAAAAATGAGAAAAATGGT
GTATTTGGAAAGTCAATCAAGTGGAATTTTGAAAAATTTGTCATTGACAAGTATGGAAATGTGATAAAAAGATCTACTTTTCTCAAGAATTTGAAGCTGATTGAGGACAAAATATTCAAT
TTAATCGAGGAAGACATTGTTATAGACAAATGCTATCCTCTTCCCGATGATTTTTTGTTATAG

Retrieve as FASTA