Entry information : ArubGPx03
Entry ID 10765
Creation 2012-03-16 (Christophe Dunand)
Last sequence changes 2012-03-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-23 (Catherine Mathe (Scipio))
Peroxidase information: ArubGPx03
Name ArubGPx03
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Ascoideaceae Ascoidea
Organism Ascoidea rubescens    [TaxId: 54195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ArubGPx03
start..stop
S start..stop
CcasGPx01 261 2e-91 1..159 1..159
SkluGPx01 259 3e-90 1..159 12..170
LtheGPx01 253 4e-88 1..159 1..159
PpasGPx01 252 7e-88 1..159 1..159
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 520786..521265 480  
join(520786..521265)


exon

Literature and cross-references ArubGPx03
DNA ref. JGI genome:   scaffold_2 (520786..521265)
Cluster/Prediction ref. JGI gene:   31478
Protein sequence: ArubGPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   160
PWM (Da):   %s   17827.11  
PI (pH):   %s   8.42
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSTFYDLSPL DKAGNPYPFS ELKGKVVLIV NVASKCGFTP QYKGLQELYQ KYNEKGLEII GFPCNQFGHQ EPGTQEEIAS FCSTTYGVTF PIMKKVDVNG ANADPVYEYL KSKKSGLLGF 
KGIKWNFEKF LVNQNGEVVE RYGSITKPES ISQKIEKLL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTACCT TCTACGATTT ATCTCCTCTT GACAAGGCTG GCAACCCTTA TCCTTTCTCA GAATTGAAGG GAAAGGTTGT CTTGATTGTC AATGTTGCCT CCAAATGTGG TTTCACTCCT  CAATATAAGG GATTGCAGGA ATTGTATCAA AAATATAATG AAAAGGGTTT GGAGATCATT GGTTTCCCAT GCAATCAATT TGGTCATCAA GAGCCTGGTA CCCAAGAAGA AATTGCTTCT  TTTTGCTCCA CGACCTATGG TGTTACTTTT CCCATTATGA AAAAAGTCGA TGTCAATGGT GCGAATGCTG ATCCTGTTTA TGAATATCTT AAATCAAAGA AAAGTGGTTT ATTGGGTTTT  AAAGGTATTA AATGGAATTT TGAAAAGTTT TTAGTCAATC AAAATGGCGA AGTTGTTGAA AGATATGGTT CAATTACAAA ACCTGAGTCT ATTTCTCAAA AGATTGAAAA GTTATTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTACCT TCTACGATTT ATCTCCTCTT GACAAGGCTG GCAACCCTTA TCCTTTCTCA GAATTGAAGG GAAAGGTTGT CTTGATTGTC AATGTTGCCT CCAAATGTGG TTTCACTCCT  CAATATAAGG GATTGCAGGA ATTGTATCAA AAATATAATG AAAAGGGTTT GGAGATCATT GGTTTCCCAT GCAATCAATT TGGTCATCAA GAGCCTGGTA CCCAAGAAGA AATTGCTTCT  TTTTGCTCCA CGACCTATGG TGTTACTTTT CCCATTATGA AAAAAGTCGA TGTCAATGGT GCGAATGCTG ATCCTGTTTA TGAATATCTT AAATCAAAGA AAAGTGGTTT ATTGGGTTTT  AAAGGTATTA AATGGAATTT TGAAAAGTTT TTAGTCAATC AAAATGGCGA AGTTGTTGAA AGATATGGTT CAATTACAAA ACCTGAGTCT ATTTCTCAAA AGATTGAAAA GTTATTGTAG 

Retrieve as FASTA