Entry information : EglPrx[P]27
Entry ID 10849
Creation 2012-05-03 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-23 (Christophe Dunand)
Peroxidase information: EglPrx[P]27
Name EglPrx[P]27
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]27
start..stop
S start..stop
EgrPrx[P]27 385 1e-135 1..291 1..320
EguPrx[P]27 368 7e-129 1..291 1..320
EgrPrx[P]30 287 5e-97 1..291 1..325
EglPrx[P]30 285 2e-96 1..291 1..323
Literature and cross-references EglPrx[P]27
Protein sequence: EglPrx[P]27
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   284 (262)
PWM (Da):   %s   31203.24 (28803.0)  
PI (pH):   %s   10.46 (10.54) Peptide Signal:   %s   cut: 23 range:23-284
Sequence
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Send to Peroxiscan
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MAPV*FNLVH AFILLTLETT AFAIMLRAEL TxxxGYDASI LLDSMPSFAS EKFAIPNNNS VRGFEVINWI KATVNEARGG PVVSCADILA IAA*DSVIAI SKGWPKYYR* TRDSNAARRT  xVEGSAQKKR LNRGKQGRGS SISSFAF*QY L*HNQVLHKS KPRH**LGRP VRCTHTRICS VHNIQRTFAH SLQLFCPPFP INESDPRLAA LDQTPAVFDT LYYKNLLQQK GLLHSDQALL 
NNRLAAKLVK SYSEEGERFQ REFTKSMVKM GNIKPLTGER GQGRCDCRRA N 

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5' and PS are missing due to NNNN.
DNA
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ATGGCTCCAG TTTGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGAGACCACA GCTTTCGCCA TTATGCTCCG TGCCGAGCTC ACACnnnnnn nnnnnnnnnn nnnnnGTCCT  CAAATGGGTA CTAAGATGTC TATGCGTACT TTTTGCACAC CTTTTTATTT GCTCTTATTA TGTGCATGCT TAATGAGTTC TGGGATAATT GATAATGCAG GGATACGACG CTTCAATTCT  TTTGGACTCT ATGCCTTCCT TTGCTAGCGA AAAGTTTGCC ATTCCTAATA ACAATTCAGT CAGAGGATTC GAAGTAATCA ACTGGATCAA GGCAACAGTT AATGAAGCTC GTGGAGGCCC  TGTGGTCTCT TGTGCAGACA TCTTGGCCAT CGCTGCCTGA GACTCTGTCA TAGCGGTACG TATTAATTAC TCGCATTATC GTCCAATTTC TAAAGGATGG CCTAAATACT ACAGATGAAC  AAGAGACAAC AAATATGTGG GAATAATTTG TTATTATTCC AATGCAGCTA GGAGGACTnn nGTGGAAGGT TCGGCTCAGA AGAAGAGACT CAACCGTGGC AAGCAAGGAC GAGGCTCAAG  CATCTCTTCC TTCGCCTTTT AGCAATATCT CTAACATAAC CAAGTCCTTC ATAAATCAAA GCCTCGACAT TAATGACTTG GTCGTCCTGT CCGGTGCACA CACACTAGGA TATGCTCGGT  GCACAATATT CAGAGGACGG ATCTACAGTG ACACAAACAT TGACCGACCT TTGCACACAG CCTTCAGTTG TTTTGCCCAC CCTTTCCAAT CAACGAATCC GACCCTAGGC TCGCTGCTTT  GGATCAAACT CCTGCTGTCT TTGATACTTT GTACTATAAA AACTTGTTAC AGCAAAAAGG GCTTCTCCAT TCTGATCAGG CGCTTCTCAA CAATCGCCTA GCTGCCAAGC TGGTCAAGTC  TTACAGCGAA GAAGGCGAGA GGTTTCAGAG AGAATTCACG AAATCCATGG TTAAGATGGG AAACATAAAG CCTTTGACTG GTGAACGTGG CCAAGGTCGA TGCGACTGTA GACGAGCGAA 

Retrieve as FASTA  
CDS
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ATGGCTCCAG TTTGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGAGACCACA GCTTTCGCCA TTATGCTCCG TGCCGAGCTC ACACnnnnnn nnGGATACGA CGCTTCAATT  CTTTTGGACT CTATGCCTTC CTTTGCTAGC GAAAAGTTTG CCATTCCTAA TAACAATTCA GTCAGAGGAT TCGAAGTAAT CAACTGGATC AAGGCAACAG TTAATGAAGC TCGTGGAGGC  CCTGTGGTCT CTTGTGCAGA CATCTTGGCC ATCGCTGCCT GAGACTCTGT CATAGCGATT TCTAAAGGAT GGCCTAAATA CTACAGATGA ACAAGAGACT CCAATGCAGC TAGGAGGACT  nnnGTGGAAG GTTCGGCTCA GAAGAAGAGA CTCAACCGTG GCAAGCAAGG ACGAGGCTCA AGCATCTCTT CCTTCGCCTT TTAGCAATAT CTCTAACATA ACCAAGTCCT TCATAAATCA  AAGCCTCGAC ATTAATGACT TGGTCGTCCT GTCCGGTGCA CACACACTAG GATATGCTCG GTGCACAATA TTCAGAGGAC GTTTGCACAC AGCCTTCAGT TGTTTTGCCC ACCCTTTCCA  ATCAACGAAT CCGACCCTAG GCTCGCTGCT TTGGATCAAA CTCCTGCTGT CTTTGATACT TTGTACTATA AAAACTTGTT ACAGCAAAAA GGGCTTCTCC ATTCTGATCA GGCGCTTCTC  AACAATCGCC TAGCTGCCAA GCTGGTCAAG TCTTACAGCG AAGAAGGCGA GAGGTTTCAG AGAGAATTCA CGAAATCCAT GGTTAAGATG GGAAACATAA AGCCTTTGAC TGGTGAACGT 
GGCCAAGGTC GATGCGACTG TAGACGAGCG AAC 

Retrieve as FASTA