Entry information : EglPrx28
Entry ID 10851
Creation 2012-05-03 (Qiang Li)
Last sequence changes 2012-05-03 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-21 (Christophe Dunand)
Peroxidase information: EglPrx28
Name EglPrx28
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx28
start..stop
S start..stop
EgrPrx28 275 6e-95 1..133 143..275
EguPrx31 267 9e-92 1..132 142..273
EgrPrx31 267 9e-92 1..132 142..273
EglPrx31 266 1e-91 1..132 142..273
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..399 399  
join(1..399)


exon

Literature and cross-references EglPrx28
Protein sequence: EglPrx28
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   133
PWM (Da):   %s   14344.14  
PI (pH):   %s   6.24
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LGGPSWEVRL GRRDSTRASR TTANTDIPAP NMDLPSLIST FQKQGLDTRD LVALSGAHTI GFAQCRVFRN RTYNDDNIAA DFAGSLQSLC PRTGEDSNLA GLDPSPAQFD ALYFHNLLAQ 
KGLLHSDQAL YSS 

Retrieve as FASTA  
Remarks Partial sequence from NGS. Two ends are missing due to NNNN.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTGGAGGGC CTTCATGGGA AGTACGACTT GGAAGGAGGG ACTCGACCAG GGCGAGTAGG ACAACGGCCA ACACTGACAT TCCCGCGCCA AACATGGACT TGCCTTCACT GATCAGCACG  TTCCAAAAGC AAGGTCTCGA CACACGGGAC TTGGTCGCAC TGAGCGGTGC GCACACAATT GGGTTCGCAC AATGTCGCGT TTTCAGGAAC CGCACATACA ATGACGACAA CATCGCCGCC 
GATTTCGCCG GGAGCCTCCA GTCCGCATTG TACTTCCACA ATCTGTTGGC GCAAAAGGGG CTTCTTCACT CTGATCAGGC GCTTTACAGT AGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTGGAGGGC CTTCATGGGA AGTACGACTT GGAAGGAGGG ACTCGACCAG GGCGAGTAGG ACAACGGCCA ACACTGACAT TCCCGCGCCA AACATGGACT TGCCTTCACT GATCAGCACG  TTCCAAAAGC AAGGTCTCGA CACACGGGAC TTGGTCGCAC TGAGCGGTGC GCACACAATT GGGTTCGCAC AATGTCGCGT TTTCAGGAAC CGCACATACA ATGACGACAA CATCGCCGCC 
GATTTCGCCG GGAGCCTCCA GTCCGCATTG TACTTCCACA ATCTGTTGGC GCAAAAGGGG CTTCTTCACT CTGATCAGGC GCTTTACAGT AGT 

Retrieve as FASTA