Entry information : EglPrx[P]142
Entry ID 10961
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-03-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EglPrx[P]142
Name EglPrx[P]142
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]142
start..stop
S start..stop
EgrPrx144 223 3e-74 1..129 27..201
EcamPrx144 217 2e-72 1..129 8..182
EguPrx144 217 5e-72 1..129 27..201
RcPrx36 180 1e-57 1..129 28..202
Literature and cross-references EglPrx[P]142
Protein sequence: EglPrx[P]142
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   133
PWM (Da):   %s   14319.14  
PI (pH):   %s   6.75
Sequence
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Send to Peroxiscan
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SCHAQLSSTF YDESCPNALA AIRTSIRTAV SRERRMAASL IRLHFHDCFV QGCDASGSVR GYEVIDDAKS EVEKICPGVG SPSWTVKRPS LVSSDLPSFQ DGLEILVSRF AGKGLSARDM 
VALSGIYEML IQT 

Retrieve as FASTA  
Remarks Pseudogene from NGS. 3' and 5' ends are missing due to NNNN.
DNA
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TCCTGCCATG CGCAGCTTTC CTCCACGTTT TACGATGAGT CGTGCCCCAA TGCCCTCGCC GCGATTCGGA CTTCCATCAG AACCGCAGTC TCGAGGGAGC GCCGGATGGC TGCTTCTCTC  ATCCGACTCC ATTTCCACGA TTGCTTCGTC CAGGGTTGTG ACGCGTCGAn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnGGTTC CGTGAGAGGT  TACGAGGTGA TTGACGACGC CAAGTCGGAA GTGGAGAAGA TCTGTCCAGG AGTAAGTCTT CCCATAGTTC TCAAGATATG CATCTTATGA TCACTTGATT ACTTTCAAAT ATCGACTACG  AGTCTAAATC ATTTTCCTTA CTGATATAAC TGATGCTGCT GTGACAAAAA TGTAGGTTGG CAGTCCTTCT TGGACGGTGA AGCTCGGAAG AAGAGACTCG ATCACCGCAA GCCCATCGCT  CGTGTCAAGC GATCTTCCAT CGTTTCAAGA TGGCCTTGAG ATACTCGTAT CTCGATTTGC AGGCAAGGGC CTTAGTGCTA GAGACATGGT TGCCCTCTCA GGTATATACG AAATGCTTAT 
TCAAACCTGA 

Retrieve as FASTA  
CDS
Send to BLAST
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TCCTGCCATG CGCAGCTTTC CTCCACGTTT TACGATGAGT CGTGCCCCAA TGCCCTCGCC GCGATTCGGA CTTCCATCAG AACCGCAGTC TCGAGGGAGC GCCGGATGGC TGCTTCTCTC  ATCCGACTCC ATTTCCACGA TTGCTTCGTC CAGGGTTGTG ACGCGTCGGG TTCCGTGAGA GGTTACGAGG TGATTGACGA CGCCAAGTCG GAAGTGGAGA AGATCTGTCC AGGAGTTGGC  AGTCCTTCTT GGACGGTGAA GCGCCCATCG CTCGTGTCAA GCGATCTTCC ATCGTTTCAA GATGGCCTTG AGATACTCGT ATCTCGATTT GCAGGCAAGG GCCTTAGTGC TAGAGACATG 
GTTGCCCTCT CAGGTATATA CGAAATGCTT ATTCAAACCT GA 

Retrieve as FASTA