Entry information : EglPrx[P]166
Entry ID 10985
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EglPrx[P]166
Name EglPrx[P]166
Class Class III peroxidase     [Orthogroup: Prx074]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]166
start..stop
S start..stop
EgrPrx[P]166 579 0 1..297 1..319
EguPrx[P]166 565 0 1..297 1..319
EcamPrx[P]166 427 7e-154 46..297 1..220
EglPrx167 386 2e-137 46..297 3..222
Literature and cross-references EglPrx[P]166
Protein sequence: EglPrx[P]166
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   296 (271)
PWM (Da):   %s   31487.83 (28846.5)  
PI (pH):   %s   9.23 (9.17) Peptide Signal:   %s   cut: 26 range:26-296
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNTALKIC FVFFVCSIAS RPALAQLSNQ NYYATRCPKA NxxxxRGFNV IDTIKSKMEK LCPGVVSCAD ILAVVARDSV VEVFYY*SLT EYTFEAIQRx SFLNLYGFIE FDLQLGGRSW  QVQLGRRDST TASLNAANTN LPAPTLNLSA LITSFSNKGF TAKEMVALSG SHTIGQARCV TFRNRLYNEN DISSSFATSL KAQCPSSGGD NKLSPLDITS PTSFDSAYFS NLVSQKGLLH 
SDQQLFSGGS TNAQVTTYSK NLDLFKNDFA KAMVKMGGLS PLTGSAGQIR TNCKRVN 

Retrieve as FASTA  
Remarks Pseudogene from NGS. PS and fragment are missing due to NNNN. Stop in frame.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA ATACAGCCCT CAAAATCTGC TTCGTTTTCT TCGTTTGCTC GATCGCATCA AGACCTGCCT TGGCGCAATT GTCTAACCAA AATTACTATG CTACAAGGTG CCCAAAAGCA  CTCGATACCA TCAAATCCGC CGTGAAATCA GCAGTCGCCA AGGAGGCTCG CATGGGAGCA TCTTTACTCC GTCTTCACTT CCACGATTGC TTCGTCAATG CAAGTCTCAT TTGCTTTCTT  CCTCCGCTCT ATGTTTTTGC GCTTCACGTC GTTCTCATAC TTTTGTTGAT GTGTCGCATC CATACATTAG TGAGTACAGT AAGTTTAGTA GAAAAAATAA TTCATAGAAA ATTGTGACCA  ACGTTATGGA CATTCGCATC TGTAAGGATT TTTGCAACAA GTGAGATACA CAGGCCAATG ATTCCATTAA ATTAAGAAAG AACGGACAGT GAAACGATCA TAGCACACCA TTAGAAGACC  TGCCAACCTT GTGTCTCTAA ATTTGTCTTC TTCCTTTGTC CCTAATATTT TCTCCATATT GTATTCTATT CTAACAGACG AAACGTCTCT CTCTTAGCAT TCCTTTCCGA TTGTTGGTCG  GAAAAACAAA AACACTATTG ATTTCCTCAC AAGTCCAATA TTTGGATGAT CCTTCCTGAA TCATTGGATC TTGTAAACCC AATAAGATGA ACTATTAATG TTCTTTTTTG TAATATTTTC  TACAGAATGn nnnnnnnnnA AGGGGATTCA ACGTGATTGA CACCATCAAG TCAAAAATGG AAAAATTATG CAGTGCCCAA CCCTGGAAAT TTCTTGGAAC GTAATTTTAT TATTGATCAC  TAACGGAATA TACTTTTGAA GCAATACAAA GAnnnAGTTT CCTAAACTTA TATGGATTCA TTGAATTTGA TCTTCAGTTG GGTGGACGGA GTTGGCAAGT TCAACTAGGA AGAAGAGATT  CGACCACTGC GAGCTTAAAC GCTGCTAATA CCAACCTTCC AGCTCCAACT CTCAATCTCA GTGCCCTTAT CACCTCTTTC TCTAACAAGG GCTTCACTGC TAAAGAAATG GTGGCACTCT  CAGGATCTCA CACAATAGGC CAGGCTAGGT GTGTGACGTT CCGGAACCGA CTCTACAATG AGAATGACAT AAGCTCGTCG TTCGCCACAT CTTTAAAGGC CCAGTGCCCT AGCTCGGGAG  GTGACAACAA ACTCTCTCCT CTCGACATCA CGAGCCCGAC GTCCTTCGAC AGTGCCTACT TCAGCAACTT GGTGAGCCAA AAGGGCTTGC TTCATTCGGA CCAACAGTTG TTCAGTGGGG  GCTCGACGAA TGCTCAAGTG ACTACCTACA GCAAGAACTT GGATTTGTTC AAGAACGATT TTGCCAAGGC CATGGTCAAG ATGGGAGGCC TTAGCCCTCT CACCGGGTCT GCTGGTCAGA 
TCAGGACGAA TTGTAAAAGA GTCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA ATACAGCCCT CAAAATCTGC TTCGTTTTCT TCGTTTGCTC GATCGCATCA AGACCTGCCT TGGCGCAATT GTCTAACCAA AATTACTATG CTACAAGGTG CCCAAAAGCA  AATGnnnnnn nnnnAAGGGG ATTCAACGTG ATTGACACCA TCAAGTCAAA AATGGAAAAA TTATGCTTTT ATTATTGATC ACTAACGGAA TATACTTTTG AAGCAATACA AAGAnnnAGT  TTCCTAAACT TATATGGATT CATTGAATTT GATCTTCAGT TGGGTGGACG GAGTTGGCAA GTTCAACTAG GAAGAAGAGA TTCGACCACT GCGAGCTTAA ACGCTGCTAA TACCAACCTT  CCAGCTCCAA CTCTCAATCT CAGTGCCCTT ATCACCTCTT TCTCTAACAA GGGCTTCACT GCTAAAGAAA TGGTGGCACT CTCAGGATCT CACACAATAG GCCAGGCTAG GTGTGTGACG  TTCCGGAACC GACTCTACAA TGAGAATGAC ATAAGCTCGT CGTTCGCCAC ATCTTTAAAG GCCCAGTGCC CTAGCTCGGG AGGTGACAAC AAACTCTCTC CTCTCGACAT CACGAGCCCG  ACGTCCTTCG ACAGTGCCTA CTTCAGCAAC TTGGTGAGCC AAAAGGGCTT GCTTCATTCG GACCAACAGT TGTTCAGTGG GGGCTCGACG AATGCTCAAG TGACTACCTA CAGCAAGAAC 
TTGGATTTGT TCAAGAACGA TTTTGCCAAG GCCATGGTCA AGATGGGAGG CCTTAGCCCT CTCACCGGGT CTGCTGGTCA GATCAGGACG AATTGTAAAA GAGTCAAT 

Retrieve as FASTA