Entry information : EglPrx[P]171
Entry ID 10990
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-15 (Qiang Li)
Peroxidase information: EglPrx[P]171
Name EglPrx[P]171
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]171
start..stop
S start..stop
EgrPrx[P]171 159 2e-52 1..99 1..143
EguPrx[P]171 159 4e-52 1..99 1..143
EcamPrx[P]171 102 1e-29 14..99 51..180
EguPrx29 95 3e-25 1..99 180..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..427 427  
join(1..427)


exon

Literature and cross-references EglPrx[P]171
Protein sequence: EglPrx[P]171
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   98
PWM (Da):   %s   11016.77  
PI (pH):   %s   11.82
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

FLQQGFIAKE MVALLVSHTI GKARHTTFRS RLDN*SNINS LFITLTSFDN SYLRNLVSQK xLLHLDFWSN LxNAMVMMGG LSHLTRFSDH IRMNRRKVN 

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5' is missing due to NNNN. Stop in frame.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCnC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCGACA ACTAAAGCAA CATAAACTCA  TTGTTCATCA CACTTACATC CTTCGACAAC AGCTACTTGC GCAACTTGGT GAGCCAAAAG GCnCTACTCC ACTTAGACTT CTGGAGCAAC TTGCTnAATG CAATGGTCAT GATGGGAGGC 
CTTAGCCATC TTACCAGGTT TAGTGATCAT ATAAGGATGA ATCGTAGGAA GGTCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCnC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCGACA ACTAAAGCAA CATAAACTCA  TTGTTCATCA CACTTACATC CTTCGACAAC AGCTACTTGC GCAACTTGGT GAGCCAAAAG GCnCTACTCC ACTTAGACTT CTGGAGCAAC TTGCTnAATG CAATGGTCAT GATGGGAGGC 
CTTAGCCATC TTACCAGGTT TAGTGATCAT ATAAGGATGA ATCGTAGGAA GGTCAAT 

Retrieve as FASTA