Entry information : EglPrx[P]186
Entry ID 11005
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EglPrx[P]186
Name EglPrx[P]186
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]186
start..stop
S start..stop
EcamPrx[P]186 148 6e-48 1..73 97..169
EgrPrx[P]186 140 9e-45 1..73 93..165
EguPrx[P]186 137 2e-43 1..73 97..169
EgrPrx[P]171 104 4e-31 11..73 75..137
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..219 219  
join(1..219)


exon

Literature and cross-references EglPrx[P]186
Protein sequence: EglPrx[P]186
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   73
PWM (Da):   %s   8025.11  
PI (pH):   %s   6.33
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

HEPYILRQQL LAQLGEPKGL LHLDQxxFSG DLMDHQVTVY LNNLDLIWSN FANAMVKMGG LSHLTKFSDH IRM 

Retrieve as FASTA  
Remarks Pseudogene from NGS. Short 3'.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CATGAGCCTT ACATCCTTCG ACAACAGCTA CTTGCGCAAC TTGGTGAGCC AAAAGGCCTA CTCCACTTAG ACCAACnnnT GTTTAGTGGG GATTTGATGG ACCATCAAGT GACTGTATAC 
CTCAACAATT TGGATTTGAT CTGGAGCAAC TTTGCTAATG CCATGGTCAA GATGGGAGGC CTTAGCCATC TTACCAAGTT TAGTGATCAT ATAAGGATG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CATGAGCCTT ACATCCTTCG ACAACAGCTA CTTGCGCAAC TTGGTGAGCC AAAAGGCCTA CTCCACTTAG ACCAACnnnT GTTTAGTGGG GATTTGATGG ACCATCAAGT GACTGTATAC 
CTCAACAATT TGGATTTGAT CTGGAGCAAC TTTGCTAATG CCATGGTCAA GATGGGAGGC CTTAGCCATC TTACCAAGTT TAGTGATCAT ATAAGGATG 

Retrieve as FASTA