Entry information : EglPrx[P]188
Entry ID 11006
Creation 2012-05-16 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Qiang Li)
Peroxidase information: EglPrx[P]188
Name EglPrx[P]188
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]188
start..stop
S start..stop
EcamPrx[P]188 123 7e-38 1..69 134..204
EgrPrx[P]188 114 1e-34 1..69 116..184
EguPrx[P]188 107 5e-32 1..69 115..186
EglPrx167 85 1e-22 6..69 159..222
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..207 207  
join(1..207)


exon

Literature and cross-references EglPrx[P]188
Protein sequence: EglPrx[P]188
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   67
PWM (Da):   %s   6456.05  
PI (pH):   %s   5.53
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

G*FWKSQKGL LHLDQQLLEG GSTDDHVTAY xxxxxxx*ND FAAAMDKMGC LSPLTGSSSQ IRMNCREVN 

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5\' and PS are missing. Stops in frame.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGCTAATTCT GGAAGAGCCA AAAGGGCCTA CTCCACCTGG ACCAACAATT GCTCGAGGGA GGTTCAACAG ACGATCATGT GACCGCCTAT nnnnnnnnnn nnnnnnnnnn nTAAAACGAT 
TTTGCTGCTG CCATGGACAA GATGGGATGC CTTAGCCCTC TCACTGGGTC TAGCAGTCAG ATAAGGATGA ATTGCAGGGA GGTCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGCTAATTCT GGAAGAGCCA AAAGGGCCTA CTCCACCTGG ACCAACAATT GCTCGAGGGA GGTTCAACAG ACGATCATGT GACCGCCTAT nnnnnnnnnn nnnnnnnnnn nTAAAACGAT 
TTTGCTGCTG CCATGGACAA GATGGGATGC CTTAGCCCTC TCACTGGGTC TAGCAGTCAG ATAAGGATGA ATTGCAGGGA GGTCAAT 

Retrieve as FASTA