Entry information : Egl1CysPrx[P]02
Entry ID 11047
Creation 2012-05-21 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-02-24 (Christophe Dunand)
Peroxidase information: Egl1CysPrx[P]02
Name Egl1CysPrx[P]02
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Egl1CysPrx[P]02
start..stop
S start..stop
Egr1CysPrx[P]02 275 1e-96 1..140 26..186
Egu1CysPrx[P]02 263 6e-92 1..140 26..186
Ecam1CysPrx[P]02 259 2e-90 7..140 32..185
Egl1CysPrx03-1 231 4e-79 2..140 40..197
Literature and cross-references Egl1CysPrx[P]02
Protein sequence: Egl1CysPrx[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   140
PWM (Da):   %s   15561.17  
PI (pH):   %s   9.48
Sequence
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Send to Peroxiscan
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VPELERKGGV KLLSFSCDEV KSHKAWIKDI EAFTLNLVEP EEKDASGKQV PSRALHIVGP DKKIKLSFLY PTSMGRNMDE VARVLDSLQR AMKHKIATPC NWKPGDAVVI SLSISNEQAK 
EMSPQGFKTA DLLSRKYYLR 

Retrieve as FASTA  
Remarks Pseudogene sequence from NGS. Two ends and PS are missing due to NNNN. join(1..102,540..626,831..1061)
DNA
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GTGCCGGAGC TCGAGCGGAA GGGGGGnGTG AAGCTCCTGA GCTTTTCCTG CGACGAGGTC AAGTCGCACA AGGCGTGGAT CAAGGACATA GAGGCCTTCA CTGTCCGCTA CTCTTCTCTC  TCACTCTGCC TATTAGACCT TTTCATCACT TGGCATACAT ATATACTGCA TGTCCTGTAT TAACTTGCCT GTTTTGATAT GGATGTTGGG TTTGATCTGA TTTGGGTGAT TGTATTGTTC  AAAAAGGAAA AGAAGGAGAA CTTATAGAAA TGTGTGGTAT TATGGCTTTT GTGCAATTTT CATTATTCCA ATTTCAAGCC AACAnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnC TCAACCTGGT CGAGCCAGAG GAGAAAGACG CTTCAGGGAA GCAAGTCCCT TCTAGAGCTC  TGCACATCGT CGGTCCTGAT AAGAAGGTAT ACATGCCCTT CTACCTTTTC CTTCTCCCGT TAATTAAACT TGTATCAAAT GAAACAAACT GCATAAACCA ATGCCATCTT ATGCATGTCT  GTTATATGTG TATTACTTAA AGTAGCATAA ACCATTTATC CCATTTAAAC AGAGCAGATG CAGCAGGACT CTGGATCATC TATTTTCACA ATATAACATA ATTTGTATTG ATCAAGCTGA  GTTTCCTGTA CCCCACGAGC ATGGGAAGGA ACATGGACGA GGTGGCGAGG GTGCTGGACT CCCTGCAGAG GGCGATGAAG CACAAGATCG CCACCCCATG CAACTGGAAG CCAGGGGACG 
CGGTCGTCAT CTCGCTGTCC ATCTCCAACG AGCAGGCCAA GGAGATGTCC CCGCAGGGCT TCAAGACCGC CGATCTTCTG TCCAGGAAGT ATTACCTCCG C 

Retrieve as FASTA  
CDS
Send to BLAST
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GTGCCGGAGC TCGAGCGGAA GGGGGGnGTG AAGCTCCTGA GCTTTTCCTG CGACGAGGTC AAGTCGCACA AGGCGTGGAT CAAGGACATA GAGGCCTTCA CTCTCAACCT GGTCGAGCCA  GAGGAGAAAG ACGCTTCAGG GAAGCAAGTC CCTTCTAGAG CTCTGCACAT CGTCGGTCCT GATAAGAAGA TCAAGCTGAG TTTCCTGTAC CCCACGAGCA TGGGAAGGAA CATGGACGAG  GTGGCGAGGG TGCTGGACTC CCTGCAGAGG GCGATGAAGC ACAAGATCGC CACCCCATGC AACTGGAAGC CAGGGGACGC GGTCGTCATC TCGCTGTCCA TCTCCAACGA GCAGGCCAAG 
GAGATGTCCC CGCAGGGCTT CAAGACCGCC GATCTTCTGT CCAGGAAGTA TTACCTCCGC 

Retrieve as FASTA