Entry information : EglPrxII01
Entry ID 11065
Creation 2012-05-21 (Qiang Li)
Last sequence changes 2016-01-25 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-26 (Achraf Jemmat)
Peroxidase information: EglPrxII01
Name EglPrxII01
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type Vascular tissue
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrxII01
start..stop
S start..stop
EcamPrxII01 393 1e-141 1..223 1..223
EgrPrxII01 328 8e-116 1..223 1..211
PtrtrPrxII05 304 2e-106 1..223 1..211
CclPrxII04 301 3e-105 1..223 1..225
Literature and cross-references EglPrxII01
EST ref. GenBank:   JK643320.1 [5' end]
Protein sequence: EglPrxII01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   223
PWM (Da):   %s   23026.26  
PI (pH):   %s   9.89
Sequence
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Send to Peroxiscan
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MAASLSISRL LTTTSTTKTA AAAAALLPRK SLSFTSLAVP RRSSLAVAVP RRPCKPLRLS TAATPARASI SVGDKLPDAT LSYFDPAGEL QTTTVSALTA GKKSILFAVP GAFTPTCSQK 
HLPGFVEKAG ELKAKGVDTI ACVSVNDAFV MRAWKENLGI GDEVLLLSxG NGDFTRAIGC ELDLSDKPIG LGVRSRRYAL LAEDGVVKVL NLEEGGAFTF SSA 

Retrieve as FASTA  
Remarks Complete sequence from NGS and 1 EST. 3' end is mising due to NNNN.
DNA
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ATGGCAGCTT CTCTCTCCAT CTCCAGACTC CTCACCACCA CCTCCACCAC CAAAACCGCC GCCGCCGCCG CCGCCCTTCT CCCTCGCAAA TCCCTCTCCT TCACCTCCCT CGCCGTCCCC  CGCCGCTCCT CCCTCGCCGT CGCCGTCCCC CGCCGCCCCT GCAAGCCCCT CCGCCTCTCC ACCGCCGCCA CCCCCGCCCG CGCCTCCATC TCCGTTGGCG ACAAGCTCCC GGACGCCACC  CTCTCCTACT TCGACCCCGC CGGCGAGCTC CAGACCACCA CCGTCTCCGC CCTCACCGCC GGGAAGAAGT CGATCCTCTT CGCCGTCCCG GGGGCCTTCA CCCCGACCTG CTCCCAGAAG  CACCTCCCCG GGTTCGTGGA GAAGGCCGGG GAGCTGAAGG CGAAGGGGGT GGACACCATC GCCTGCGTCT CGGTGAACGA CGCCTTCGTG ATGCGGGCGT GGAAGGAGAA CCTGGGGATC  GGCGACGAGG TCCTGCTGCT GTCGGnCGGG AACGGGGACT TCACGAGGGC GATCGGGTGC GAGCTCGACC TGAGCGACAA GCCCATCGGG CTCGGGGTGC GGTCGCGGCG GTACGCGCTG 
CTCGCGGAGG ACGGCGTCGT GAAGGTGCTC AACCTGGAGG AAGGCGGGGC CTTCACCTTC AGCAGTGCC 

Retrieve as FASTA  
CDS
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ATGGCAGCTT CTCTCTCCAT CTCCAGACTC CTCACCACCA CCTCCACCAC CAAAACCGCC GCCGCCGCCG CCGCCCTTCT CCCTCGCAAA TCCCTCTCCT TCACCTCCCT CGCCGTCCCC  CGCCGCTCCT CCCTCGCCGT CGCCGTCCCC CGCCGCCCCT GCAAGCCCCT CCGCCTCTCC ACCGCCGCCA CCCCCGCCCG CGCCTCCATC TCCGTTGGCG ACAAGCTCCC GGACGCCACC  CTCTCCTACT TCGACCCCGC CGGCGAGCTC CAGACCACCA CCGTCTCCGC CCTCACCGCC GGGAAGAAGT CGATCCTCTT CGCCGTCCCG GGGGCCTTCA CCCCGACCTG CTCCCAGAAG  CACCTCCCCG GGTTCGTGGA GAAGGCCGGG GAGCTGAAGG CGAAGGGGGT GGACACCATC GCCTGCGTCT CGGTGAACGA CGCCTTCGTG ATGCGGGCGT GGAAGGAGAA CCTGGGGATC  GGCGACGAGG TCCTGCTGCT GTCGGnCGGG AACGGGGACT TCACGAGGGC GATCGGGTGC GAGCTCGACC TGAGCGACAA GCCCATCGGG CTCGGGGTGC GGTCGCGGCG GTACGCGCTG 
CTCGCGGAGG ACGGCGTCGT GAAGGTGCTC AACCTGGAGG AAGGCGGGGC CTTCACCTTC AGCAGTGCC 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCCGGGTCGA CCCACGCGTC CCGGCCCTTG TCTCTCTCTC TCTCTCTCTC TCTAGCAGCA GCAATGGCAG CTTCTCTCTC CATCTCCAGA CTCCTCACCA CCACCTCCAC CACCAAAACC  GCCGCCGCCG CCGCCGCCCT TCTCCCTCGC AAATCCCTCT CCTTCACCTC CCTCGCCGTC CCCCGCCGCT CCTCCCTCGC CGTCGCCGTC CCCCGCCGCC CCTGCAAGCC CCTCCGCCTC  TCCACCGCCG CCACCCCCGC CCGCGCCTCC ATCTCCGTTG GCGACAAGCT CCCGGACGCC ACCCTCTCCT ACTTCGACCC CGCCGGCGAG CTCCAGACCA CCACCGTCTC CGCCCTCACC  GCCGGGAAGA AGTCGATCCT CTTCGCCGTC CCGGGGGCCT TCACCCCGAC CTGCTCCCAG AAGCACCTCC CCGGGTTCGT GGAGAAGGCC GGGGAGCTGA AGGCGAAGGG GGTGGACACC  ATCGCCTGCG TCTCGGTGAA CGACGCCTTC GTGATGCGGG CGTGGAAGGA GAACCTGGGG ATCGGCGACG AGGTCCTGCT GCTGTCGGnC GGGAACGGGG ACTTCACGAG GGCGATCGGG  TGCGAGCTCG ACCTGAGCGA CAAGCCCATC GGGCTCGGGG TGCGGTCGCG GCGGTACGCG CTGCTCGCGG AGGACGGCGT CGTGAAGGTG CTCAACCTGG AGGAAGGCGG GGCCTTCACC 
TTCAGCAGTG CC 

Retrieve as FASTA