Entry information : EglGPx[P]11
Entry ID 11079
Creation 2012-05-22 (Qiang Li)
Last sequence changes 2013-02-07 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-19 (Christophe Dunand)
Peroxidase information: EglGPx[P]11
Name EglGPx[P]11
Class Plant glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglGPx[P]11
start..stop
S start..stop
EcamGPx[P]11 136 8e-45 1..68 1..68
EguGPx[P]11 134 8e-44 1..68 1..68
EcamGPx04 80 1e-21 1..48 61..108
EglGPx04 79 7e-21 1..48 89..136
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..204 204  
join(1..204)


exon

Literature and cross-references EglGPx[P]11
Protein sequence: EglGPx[P]11
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   66
PWM (Da):   %s   7695.11  
PI (pH):   %s   9.82
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

IEVNEEKAAP LYKFPKSGKW GIFKDEIQRN LARFLVDKNR VIIDRYYPHN ISSYH*GTV* LLKDQVHF 

Retrieve as FASTA  
Remarks Pseudogene from NGS. Short PS with Stops in it.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTGAAGTGA ACGAGGAAAA GGCAGCGCCA CTATATAAGT TCCCGAAATC AGGAAAATGG GGAATCTTCA AGGATGAAAT TCAGAGGAAC CTTGCCAGGT TCCTGGTAGA TAAGAATAGG 
GTGATTATAG ATCGTTATTA CCCCCACAAC ATCTCATCTT ACCATTGAGG TACCGTATAG CTGCTAAAGG ATCAAGTTCA TTTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTGAAGTGA ACGAGGAAAA GGCAGCGCCA CTATATAAGT TCCCGAAATC AGGAAAATGG GGAATCTTCA AGGATGAAAT TCAGAGGAAC CTTGCCAGGT TCCTGGTAGA TAAGAATAGG 
GTGATTATAG ATCGTTATTA CCCCCACAAC ATCTCATCTT ACCATTGAGG TACCGTATAG CTGCTAAAGG ATCAAGTTCA TTTC 

Retrieve as FASTA