Entry information : LinfCcP
Entry ID 11083
Creation 2012-05-24 (Christophe Dunand)
Last sequence changes 2012-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-24 (Christophe Dunand)
Peroxidase information: LinfCcP
Name LinfCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP007]
Taxonomy Eukaryota Trypanosomatidae Leishmania
Organism Leishmania infantum    [TaxId: 5671 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LinfCcP
start..stop
S start..stop
LmCcP 675 0 1..341 1..341
LbraCcP 639 0 2..341 50..389
TcrCcP 374 2e-129 2..339 37..375
TbrCcP 363 2e-125 2..335 32..368
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 670394..671419 1026  
complement(join(670394..671419))


exon

Literature and cross-references LinfCcP
Protein ref. UniProtKB:   A4HZF3
DNA ref. GenBank:   NC_009405.2 (671419..670394)
Protein sequence: LinfCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341
PWM (Da):   %s   38132.22 Transmb domain:   %s   o30-52i
PI (pH):   %s   7.17
Sequence
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Send to Peroxiscan
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MFKAPPEVGP GRKDTEEANP YKSWEHMNHT WLILMCLGCL CAGWLAGHFV EVDESKIKPK YAREDVVASA CKQFEFRPDL AATSIRTAFV LAARRAGFPA DTVDESCAVV RGLNDVAGIM  NYLSNTYPAS STEDVASLAA IAGIKYLNGP YEAILDQWRW GRNDSDTAPK RNIPKDPDQK VFSIPTILHA LGGLTEAECV ALLACHSVGE FHEDVSGLEG ATHTGKRYIL NNRYYQFLLE 
HEKAFAPLTV ARTQDNKEVA ALPQTLKCVY VKEKANGKTK KRQCVVNAAE LELLKNKTWR EFVVRYAADE ELWREQFQSA FTKMIESNFK RLRPYSDPNS A 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 21, no intron)
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCAAAG CCCCGCCGGA AGTCGGGCCT GGCCGGAAGG ACACGGAGGA GGCAAACCCG TACAAGTCGT GGGAACACAT GAATCACACG TGGCTGATCT TGATGTGTCT GGGCTGCCTC  TGCGCGGGCT GGCTGGCGGG GCACTTTGTC GAGGTGGACG AGTCGAAGAT CAAACCCAAG TACGCCAGGG AGGACGTGGT AGCATCGGCG TGTAAGCAGT TCGAGTTCCG CCCCGACTTG  GCCGCGACGA GCATTCGAAC CGCGTTTGTG TTGGCGGCGC GTCGTGCCGG GTTCCCGGCC GACACGGTCG ACGAGTCGTG CGCAGTGGTG CGGGGGCTGA ACGACGTGGC GGGGATCATG  AACTATCTCT CCAACACCTA CCCCGCCTCC TCCACCGAGG ATGTCGCCTC GCTCGCTGCC ATAGCCGGCA TCAAGTACCT GAACGGCCCC TACGAGGCAA TCCTAGATCA GTGGAGGTGG  GGCCGCAACG ACAGCGACAC GGCCCCAAAG CGCAACATTC CAAAGGACCC AGATCAGAAA GTCTTCTCGA TTCCTACGAT ACTGCACGCC CTCGGCGGCC TGACCGAGGC AGAGTGTGTG  GCGCTGCTCG CCTGCCACAG CGTCGGCGAG TTTCACGAGG ATGTGAGCGG CCTCGAAGGC GCCACGCACA CTGGGAAGCG CTACATACTC AACAACCGCT ACTACCAGTT TCTGCTGGAG  CATGAGAAGG CCTTTGCCCC GCTGACGGTG GCACGGACGC AGGACAACAA GGAGGTGGCG GCGCTGCCGC AAACTTTGAA GTGCGTCTAC GTGAAGGAGA AGGCTAACGG GAAGACAAAG  AAGCGGCAGT GTGTCGTGAA CGCGGCGGAG CTGGAGCTGC TAAAGAACAA AACGTGGCGC GAGTTCGTGG TACGCTACGC CGCGGACGAG GAGCTGTGGC GGGAGCAGTT CCAGTCGGCC 
TTCACGAAGA TGATTGAGAG CAACTTCAAG CGACTCCGTC CGTACTCGGA CCCGAATTCC GCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCAAAG CCCCGCCGGA AGTCGGGCCT GGCCGGAAGG ACACGGAGGA GGCAAACCCG TACAAGTCGT GGGAACACAT GAATCACACG TGGCTGATCT TGATGTGTCT GGGCTGCCTC  TGCGCGGGCT GGCTGGCGGG GCACTTTGTC GAGGTGGACG AGTCGAAGAT CAAACCCAAG TACGCCAGGG AGGACGTGGT AGCATCGGCG TGTAAGCAGT TCGAGTTCCG CCCCGACTTG  GCCGCGACGA GCATTCGAAC CGCGTTTGTG TTGGCGGCGC GTCGTGCCGG GTTCCCGGCC GACACGGTCG ACGAGTCGTG CGCAGTGGTG CGGGGGCTGA ACGACGTGGC GGGGATCATG  AACTATCTCT CCAACACCTA CCCCGCCTCC TCCACCGAGG ATGTCGCCTC GCTCGCTGCC ATAGCCGGCA TCAAGTACCT GAACGGCCCC TACGAGGCAA TCCTAGATCA GTGGAGGTGG  GGCCGCAACG ACAGCGACAC GGCCCCAAAG CGCAACATTC CAAAGGACCC AGATCAGAAA GTCTTCTCGA TTCCTACGAT ACTGCACGCC CTCGGCGGCC TGACCGAGGC AGAGTGTGTG  GCGCTGCTCG CCTGCCACAG CGTCGGCGAG TTTCACGAGG ATGTGAGCGG CCTCGAAGGC GCCACGCACA CTGGGAAGCG CTACATACTC AACAACCGCT ACTACCAGTT TCTGCTGGAG  CATGAGAAGG CCTTTGCCCC GCTGACGGTG GCACGGACGC AGGACAACAA GGAGGTGGCG GCGCTGCCGC AAACTTTGAA GTGCGTCTAC GTGAAGGAGA AGGCTAACGG GAAGACAAAG  AAGCGGCAGT GTGTCGTGAA CGCGGCGGAG CTGGAGCTGC TAAAGAACAA AACGTGGCGC GAGTTCGTGG TACGCTACGC CGCGGACGAG GAGCTGTGGC GGGAGCAGTT CCAGTCGGCC 
TTCACGAAGA TGATTGAGAG CAACTTCAAG CGACTCCGTC CGTACTCGGA CCCGAATTCC GCTTAG 

Retrieve as FASTA