Entry information : LbraCcP
Entry ID 11084
Creation 2012-05-24 (Christophe Dunand)
Last sequence changes 2012-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-24 (Christophe Dunand)
Peroxidase information: LbraCcP
Name LbraCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP007]
Taxonomy Eukaryota Trypanosomatidae Leishmania
Organism Leishmania braziliensis    [TaxId: 5660 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LbraCcP
start..stop
S start..stop
LinfCcP 641 0 50..389 2..341
LmCcP 624 0 50..389 2..341
TcrCcP 369 7e-127 45..387 32..375
TbrCcP 349 4e-119 50..383 32..368
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 608504..609673 1170  
complement(join(608504..609673))


exon

Literature and cross-references LbraCcP
Protein ref. UniProtKB:   A4HC12
DNA ref. GenBank:   NC_009313.1 (609673..608504)
Protein sequence: LbraCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   389
PWM (Da):   %s   43151.9  
PI (pH):   %s   8.4
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLLHRSNAIC LSSSLSAWCS AALFTRRLAH TAPAIGSVSS SSVRTRHNTF TAPPSVGPGR KDTEEANPYK SWEHINHTWL ILMCVACLCA GWLAGRFVEV DESKIKPKYA KEDVVASACK  QFEFRPDLAA TSIRVAFVLA ARRAGFPANT VDESCAVVQG LNDVAGVMNY LSNTYPTSSM EDVASLAAIA GIKYLSGPYE AILDQWKWGR DDSDATPKRN IPKDPSQKLF SIMAILHALG  GLTEAECVAL LACHSVGEFH EDVSGLDSAT HIGKRYVLSN RYYQFLLEQE KAFAPLTVAR TQDNKEVTTL PQTFKHVYVK ENVSGKTKKR QCVVNASELE LLQNKTWREL VVRYAADEEL 
WRKQFQSAFT KMIESNFKRL RLYSDPNSA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 21, no intron)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCTCC ATCGGAGTAA CGCCATCTGC CTATCTTCCT CGCTGTCGGC GTGGTGCAGC GCTGCCTTGT TTACTCGCCG CCTCGCGCAC ACAGCGCCTG CGATAGGCAG CGTCTCCTCT  TCTTCCGTCC GCACGCGTCA CAACACGTTT ACCGCTCCGC CGAGTGTCGG GCCTGGTCGG AAGGACACGG AGGAGGCGAA CCCGTACAAG TCATGGGAAC ACATCAATCA CACGTGGCTA  ATCTTGATGT GTGTTGCCTG CCTCTGCGCT GGCTGGCTAG CGGGGCGTTT TGTTGAAGTG GACGAGTCGA AGATAAAGCC GAAGTACGCT AAAGAGGATG TGGTAGCATC TGCGTGCAAG  CAGTTTGAGT TCCGCCCTGA TTTGGCGGCG ACGAGCATTC GCGTCGCGTT TGTGTTGGCG GCGCGTCGTG CCGGGTTTCC AGCCAACACG GTCGACGAGT CATGCGCAGT GGTGCAGGGG  CTAAACGACG TGGCGGGGGT CATGAACTAC CTGTCGAACA CGTATCCCAC CTCCTCCATG GAAGATGTCG CCTCGCTCGC TGCGATTGCC GGCATCAAGT ACCTGAGCGG CCCCTACGAG  GCAATCCTGG ATCAGTGGAA GTGGGGCCGC GACGACAGCG ACGCGACTCC CAAGCGCAAC ATTCCAAAGG ACCCAAGTCA GAAACTCTTC TCGATTATGG CGATACTGCA TGCCCTCGGT  GGCCTCACCG AGGCGGAGTG TGTGGCGCTG CTCGCCTGCC ACAGCGTCGG CGAGTTCCAC GAAGACGTGA GCGGCCTCGA TAGCGCCACG CACATTGGAA AGCGCTACGT ACTCAGCAAC  CGCTATTACC AGTTTCTGCT TGAGCAGGAG AAAGCCTTCG CCCCGCTGAC GGTGGCGCGG ACCCAAGACA ACAAGGAGGT GACGACGCTG CCACAGACTT TTAAGCACGT CTACGTCAAG  GAAAATGTAA GCGGCAAGAC AAAGAAGCGG CAATGTGTTG TGAACGCCTC GGAGCTGGAG TTACTACAGA ACAAAACTTG GCGGGAGCTT GTCGTTCGCT ACGCTGCGGA CGAGGAGCTG 
TGGCGGAAGC AGTTTCAGTC GGCTTTCACG AAGATGATCG AGAGCAACTT CAAACGACTC CGTTTGTACT CAGACCCGAA CTCTGCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCTCC ATCGGAGTAA CGCCATCTGC CTATCTTCCT CGCTGTCGGC GTGGTGCAGC GCTGCCTTGT TTACTCGCCG CCTCGCGCAC ACAGCGCCTG CGATAGGCAG CGTCTCCTCT  TCTTCCGTCC GCACGCGTCA CAACACGTTT ACCGCTCCGC CGAGTGTCGG GCCTGGTCGG AAGGACACGG AGGAGGCGAA CCCGTACAAG TCATGGGAAC ACATCAATCA CACGTGGCTA  ATCTTGATGT GTGTTGCCTG CCTCTGCGCT GGCTGGCTAG CGGGGCGTTT TGTTGAAGTG GACGAGTCGA AGATAAAGCC GAAGTACGCT AAAGAGGATG TGGTAGCATC TGCGTGCAAG  CAGTTTGAGT TCCGCCCTGA TTTGGCGGCG ACGAGCATTC GCGTCGCGTT TGTGTTGGCG GCGCGTCGTG CCGGGTTTCC AGCCAACACG GTCGACGAGT CATGCGCAGT GGTGCAGGGG  CTAAACGACG TGGCGGGGGT CATGAACTAC CTGTCGAACA CGTATCCCAC CTCCTCCATG GAAGATGTCG CCTCGCTCGC TGCGATTGCC GGCATCAAGT ACCTGAGCGG CCCCTACGAG  GCAATCCTGG ATCAGTGGAA GTGGGGCCGC GACGACAGCG ACGCGACTCC CAAGCGCAAC ATTCCAAAGG ACCCAAGTCA GAAACTCTTC TCGATTATGG CGATACTGCA TGCCCTCGGT  GGCCTCACCG AGGCGGAGTG TGTGGCGCTG CTCGCCTGCC ACAGCGTCGG CGAGTTCCAC GAAGACGTGA GCGGCCTCGA TAGCGCCACG CACATTGGAA AGCGCTACGT ACTCAGCAAC  CGCTATTACC AGTTTCTGCT TGAGCAGGAG AAAGCCTTCG CCCCGCTGAC GGTGGCGCGG ACCCAAGACA ACAAGGAGGT GACGACGCTG CCACAGACTT TTAAGCACGT CTACGTCAAG  GAAAATGTAA GCGGCAAGAC AAAGAAGCGG CAATGTGTTG TGAACGCCTC GGAGCTGGAG TTACTACAGA ACAAAACTTG GCGGGAGCTT GTCGTTCGCT ACGCTGCGGA CGAGGAGCTG 
TGGCGGAAGC AGTTTCAGTC GGCTTTCACG AAGATGATCG AGAGCAACTT CAAACGACTC CGTTTGTACT CAGACCCGAA CTCTGCTTAA 

Retrieve as FASTA