Entry information : NgrGPx01
Entry ID 11090
Creation 2012-05-29 (Christophe Dunand)
Last sequence changes 2012-05-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-29 (Christophe Dunand)
Peroxidase information: NgrGPx01
Name NgrGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrGPx01
start..stop
S start..stop
MfiGPx01 50 0.00000004 42..208 54..219
FpinGPx01 48 0.0000003 38..209 63..227
NtGPx04-1B 47 0.0000004 47..203 11..164
ZcelGPx01 47 0.0000008 38..206 46..213
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28607..29239 633  
complement(join(28607..29239))


exon

Literature and cross-references NgrGPx01
Protein sequence: NgrGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   210
PWM (Da):   %s   23784.05  
PI (pH):   %s   8.75
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLSRTLKQIN KLSFKSARNK TMFQSYQKQQ GLLFASYHNS AMNEPITFYN FVTKDINNNR IDLHQMKGKV CLVAFMNTEN EHCKEYLKQL SSFKLKLNGK PFELIVIPNH DLYSKRTLQL 
LNASTNSTQD RSVTGSFFNN DLTILKSTES PSGPVAACDY LTKYGSFKTI VEDFEKFVID SEGKVSYRSG SDTVLEEVME AIEGELAKLH 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATCGA GAACCTTAAA GCAAATTAAC AAATTGTCCT TTAAAAGTGC AAGAAACAAG ACAATGTTCC AATCCTATCA GAAACAACAA GGCTTGTTGT TTGCCTCATA TCACAATTCT  GCAATGAATG AACCAATTAC ATTCTATAAC TTTGTAACAA AGGATATTAA CAATAATAGA ATTGATTTAC ATCAAATGAA GGGAAAAGTT TGTTTGGTTG CCTTTATGAA TACTGAAAAT  GAGCATTGTA AAGAATATTT AAAGCAATTG AGTTCATTCA AATTGAAATT GAATGGAAAA CCTTTCGAAT TGATTGTTAT TCCAAATCAT GATTTGTATT CGAAACGTAC TTTACAATTA  TTGAATGCTT CCACTAACTC AACTCAAGAT AGATCAGTGA CAGGTTCTTT CTTTAATAAC GATTTGACAA TTCTCAAATC AACAGAATCA CCAAGTGGTC CAGTTGCAGC TTGTGATTAT  TTAACTAAAT ATGGTTCGTT CAAGACTATA GTTGAAGATT TTGAAAAGTT TGTCATTGAT AGTGAAGGAA AGGTTTCGTA CAGATCTGGA AGTGATACAG TTTTAGAAGA AGTAATGGAA 
GCCATTGAAG GAGAACTTGC CAAACTTCAT TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATCGA GAACCTTAAA GCAAATTAAC AAATTGTCCT TTAAAAGTGC AAGAAACAAG ACAATGTTCC AATCCTATCA GAAACAACAA GGCTTGTTGT TTGCCTCATA TCACAATTCT  GCAATGAATG AACCAATTAC ATTCTATAAC TTTGTAACAA AGGATATTAA CAATAATAGA ATTGATTTAC ATCAAATGAA GGGAAAAGTT TGTTTGGTTG CCTTTATGAA TACTGAAAAT  GAGCATTGTA AAGAATATTT AAAGCAATTG AGTTCATTCA AATTGAAATT GAATGGAAAA CCTTTCGAAT TGATTGTTAT TCCAAATCAT GATTTGTATT CGAAACGTAC TTTACAATTA  TTGAATGCTT CCACTAACTC AACTCAAGAT AGATCAGTGA CAGGTTCTTT CTTTAATAAC GATTTGACAA TTCTCAAATC AACAGAATCA CCAAGTGGTC CAGTTGCAGC TTGTGATTAT  TTAACTAAAT ATGGTTCGTT CAAGACTATA GTTGAAGATT TTGAAAAGTT TGTCATTGAT AGTGAAGGAA AGGTTTCGTA CAGATCTGGA AGTGATACAG TTTTAGAAGA AGTAATGGAA 
GCCATTGAAG GAGAACTTGC CAAACTTCAT TAA 

Retrieve as FASTA