Entry information : NgrDyPrx01
Entry ID 11091
Creation 2012-05-29 (Christophe Dunand)
Last sequence changes 2012-05-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-29 (Christophe Dunand)
Peroxidase information: NgrDyPrx01
Name NgrDyPrx01
Class DyP-type peroxidase B    [Orthogroup: DyPrxB001]
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrDyPrx01
start..stop
S start..stop
NgrDyPrx02 137 2e-37 149..374 124..358
EcoH7DyPrx02 130 2e-35 107..370 48..308
EcoDyPrx02_UTI89 129 4e-35 107..370 48..308
SflDyPrx02 129 4e-35 107..370 39..299
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 322961..324091 1131  
join(322961..324091)


exon

Literature and cross-references NgrDyPrx01
DNA ref. GenBank:   GG738874.1 (322961..324091)
Protein sequence: NgrDyPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   376 (353)
PWM (Da):   %s   42628.49 (40140.1)  
PI (pH):   %s   7.52 (6.80) Peptide Signal:   %s   cut: 24 range:24-376
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSSRKLLKL APLFAVASYG VISMKDTDLV SKFFNYDRKQ FYHQFMPNHH FLVQAEEETL KPQSGVVTGN FPQMAIISIK LKDYKNYEKV LKAVSLVPSI VEELTGDKQV DAEDEFALPP  VMINVALSTR FWNFLNSKDG ATFKKPEGYT KDYETKTGEF GSMPYKETEI VLHVKAENTS ICYQAIDQFL SNLPKDALES VNEHYGFQYQ DSRDLSKFID GINNPSGNDD RSVAALNSQK  GSFLIHQKWV HHHHLDSKFS VKDQEAFVGR ERVSGAELPT LPPSSHVARM RRPNGDIIPI VRQSFPYGTV SGEHGLLFIA YSNNIEKYET LLDAMVGKVH GKHNDAIMKF SNCHYSNYYY 
VPSINELNSI KTKFNK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATCAT CAAGAAAATT ACTCAAACTT GCTCCATTAT TTGCTGTAGC TTCGTATGGA GTTATATCAA TGAAGGATAC AGATCTTGTC TCTAAATTTT TTAATTATGA TCGTAAACAG  TTCTATCATC AATTCATGCC AAATCATCAC TTTCTAGTTC AGGCCGAGGA AGAAACTTTG AAACCACAAT CTGGTGTGGT GACTGGTAAC TTCCCACAAA TGGCAATTAT CAGCATTAAA  TTGAAAGATT ACAAGAATTA TGAAAAGGTT TTGAAAGCAG TTTCTCTTGT TCCTTCAATT GTTGAGGAAT TGACAGGAGA TAAACAAGTC GATGCAGAAG ATGAATTTGC ATTGCCACCT  GTCATGATTA ATGTTGCACT GAGTACTAGA TTTTGGAACT TTTTAAATTC AAAAGATGGA GCTACCTTCA AAAAGCCAGA AGGTTACACT AAGGATTATG AAACTAAAAC AGGAGAGTTT  GGTTCAATGC CATATAAGGA AACTGAAATT GTCTTGCATG TAAAGGCAGA GAATACCTCA ATTTGTTATC AAGCCATTGA TCAATTTTTG TCCAATCTCC CAAAGGATGC ACTTGAATCA  GTGAATGAAC ATTACGGATT CCAATATCAA GATTCAAGAG ATTTGAGCAA ATTCATTGAT GGTATCAATA ATCCATCCGG AAATGATGAT CGTTCAGTAG CTGCTCTCAA TTCACAAAAG  GGAAGTTTCC TCATTCATCA AAAGTGGGTC CATCACCACC ATTTAGATTC CAAATTTTCA GTTAAGGATC AGGAGGCATT CGTTGGAAGG GAGAGAGTTT CTGGAGCCGA ATTACCAACT  CTACCACCCT CTTCACACGT TGCCAGAATG AGACGACCAA ATGGTGATAT CATTCCAATT GTGAGACAGA GTTTCCCTTA TGGTACAGTG AGTGGAGAAC ATGGATTATT GTTCATTGCT  TACAGTAATA ACATTGAAAA GTATGAAACT CTATTGGATG CCATGGTTGG TAAAGTGCAC GGCAAACATA ATGATGCCAT CATGAAATTC TCCAATTGCC ACTACTCTAA TTATTATTAC 
GTTCCATCCA TCAATGAATT GAATTCTATC AAGACAAAAT TTAATAAATA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATCAT CAAGAAAATT ACTCAAACTT GCTCCATTAT TTGCTGTAGC TTCGTATGGA GTTATATCAA TGAAGGATAC AGATCTTGTC TCTAAATTTT TTAATTATGA TCGTAAACAG  TTCTATCATC AATTCATGCC AAATCATCAC TTTCTAGTTC AGGCCGAGGA AGAAACTTTG AAACCACAAT CTGGTGTGGT GACTGGTAAC TTCCCACAAA TGGCAATTAT CAGCATTAAA  TTGAAAGATT ACAAGAATTA TGAAAAGGTT TTGAAAGCAG TTTCTCTTGT TCCTTCAATT GTTGAGGAAT TGACAGGAGA TAAACAAGTC GATGCAGAAG ATGAATTTGC ATTGCCACCT  GTCATGATTA ATGTTGCACT GAGTACTAGA TTTTGGAACT TTTTAAATTC AAAAGATGGA GCTACCTTCA AAAAGCCAGA AGGTTACACT AAGGATTATG AAACTAAAAC AGGAGAGTTT  GGTTCAATGC CATATAAGGA AACTGAAATT GTCTTGCATG TAAAGGCAGA GAATACCTCA ATTTGTTATC AAGCCATTGA TCAATTTTTG TCCAATCTCC CAAAGGATGC ACTTGAATCA  GTGAATGAAC ATTACGGATT CCAATATCAA GATTCAAGAG ATTTGAGCAA ATTCATTGAT GGTATCAATA ATCCATCCGG AAATGATGAT CGTTCAGTAG CTGCTCTCAA TTCACAAAAG  GGAAGTTTCC TCATTCATCA AAAGTGGGTC CATCACCACC ATTTAGATTC CAAATTTTCA GTTAAGGATC AGGAGGCATT CGTTGGAAGG GAGAGAGTTT CTGGAGCCGA ATTACCAACT  CTACCACCCT CTTCACACGT TGCCAGAATG AGACGACCAA ATGGTGATAT CATTCCAATT GTGAGACAGA GTTTCCCTTA TGGTACAGTG AGTGGAGAAC ATGGATTATT GTTCATTGCT  TACAGTAATA ACATTGAAAA GTATGAAACT CTATTGGATG CCATGGTTGG TAAAGTGCAC GGCAAACATA ATGATGCCAT CATGAAATTC TCCAATTGCC ACTACTCTAA TTATTATTAC 
GTTCCATCCA TCAATGAATT GAATTCTATC AAGACAAAAT TTAATAAATA A 

Retrieve as FASTA