Entry information : NgrDyPrx02
Entry ID 11092
Creation 2012-05-29 (Christophe Dunand)
Last sequence changes 2012-05-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-29 (Christophe Dunand)
Peroxidase information: NgrDyPrx02
Name NgrDyPrx02
Class DyP-type peroxidase B    [Orthogroup: DyPrxB001]
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrDyPrx02
start..stop
S start..stop
ZmoDyPrx 139 7e-39 34..347 21..314
PfDyPrx03_PfO1 136 1e-37 34..357 13..316
SflDyPrx02 134 6e-37 121..354 79..299
EcoDyPrx02_K12 134 6e-37 121..354 79..299
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 193699..194799 1101  
complement(join(193699..194799))


exon

Literature and cross-references NgrDyPrx02
DNA ref. GenBank:   GG738923.1 (194799..193699)
Protein sequence: NgrDyPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   366
PWM (Da):   %s   42000.79  
PI (pH):   %s   7.03
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSLHHLHNH HHHHHAHHEN HHHHRHGEKH CQSTILTPIS DHACFVTIEL KDELKSSSNG KAMKIYFKLV EACLQIMERW NKEKCTQFAV GFGYELTNSI LGNIQDNSLD YVREYMQAEI  FPQYPKDLKG KFGGFPNTGG DLFLHIKSVN MDNCFRATQD FANHEFISPL IKKIQDETYA FLHRRNKKSG LGRDLSGFED GTENPKEMEE KIEATLTNEK DSFLLAQKWV HNLKFFNSLS  LKEQENDIGR TKEDSIELEN KPETSHVARV TLEKDGDEIE VVRQSMSFGN SSQHGLFFIS YANSGKTFIH QLESMVGKGE YATPQGHNDH IMRFSTNILG SLYFIPSIGT LLKMREKLTS 
YRPSRL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCAC TGCATCACTT GCATAATCAT CACCATCATC ATCACGCACA CCATGAGAAT CATCACCATC ATCGGCATGG TGAGAAACAT TGCCAATCGA CGATATTAAC TCCAATCTCG  GATCATGCTT GTTTTGTTAC GATTGAATTG AAGGATGAGC TGAAGAGTTC ATCAAATGGG AAGGCTATGA AAATTTATTT TAAATTAGTG GAAGCTTGTT TGCAGATTAT GGAGAGGTGG  AATAAAGAAA AATGCACACA GTTTGCTGTT GGATTTGGAT ATGAGTTGAC CAATTCAATT TTAGGAAATA TACAAGATAA TTCACTGGAT TATGTAAGAG AATATATGCA GGCAGAAATA  TTTCCACAAT ATCCTAAAGA TTTGAAGGGT AAATTTGGTG GTTTTCCAAA TACTGGTGGA GATTTATTTC TTCACATTAA ATCTGTAAAT ATGGACAATT GTTTTAGAGC TACTCAGGAT  TTTGCAAATC ATGAATTTAT TTCTCCATTG ATAAAGAAAA TTCAGGATGA AACCTATGCA TTCCTCCATA GAAGAAATAA GAAATCTGGT CTTGGAAGAG ATTTGAGTGG ATTCGAGGAT  GGAACTGAAA ATCCAAAAGA AATGGAAGAG AAAATTGAGG CAACCCTCAC CAATGAAAAG GATAGTTTCC TCTTGGCTCA GAAATGGGTT CACAATCTCA AATTTTTCAA TTCACTTTCA  TTGAAAGAAC AAGAGAATGA TATTGGAAGA ACGAAAGAGG ATAGCATCGA GTTGGAAAAT AAGCCAGAAA CTTCCCATGT GGCTCGTGTC ACTTTAGAAA AGGACGGAGA TGAAATTGAG  GTTGTGAGGC AATCAATGAG CTTTGGAAAT TCATCACAAC ATGGATTATT CTTCATTTCG TATGCAAACT CTGGAAAAAC CTTCATTCAT CAATTGGAGA GCATGGTTGG AAAGGGCGAA  TATGCCACTC CACAAGGTCA CAATGATCAT ATTATGAGAT TTTCCACTAA TATTTTAGGC TCGCTGTATT TTATTCCTTC TATTGGAACG TTATTGAAAA TGCGAGAGAA ATTGACAAGC 
TATAGACCTT CAAGGTTGTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCAC TGCATCACTT GCATAATCAT CACCATCATC ATCACGCACA CCATGAGAAT CATCACCATC ATCGGCATGG TGAGAAACAT TGCCAATCGA CGATATTAAC TCCAATCTCG  GATCATGCTT GTTTTGTTAC GATTGAATTG AAGGATGAGC TGAAGAGTTC ATCAAATGGG AAGGCTATGA AAATTTATTT TAAATTAGTG GAAGCTTGTT TGCAGATTAT GGAGAGGTGG  AATAAAGAAA AATGCACACA GTTTGCTGTT GGATTTGGAT ATGAGTTGAC CAATTCAATT TTAGGAAATA TACAAGATAA TTCACTGGAT TATGTAAGAG AATATATGCA GGCAGAAATA  TTTCCACAAT ATCCTAAAGA TTTGAAGGGT AAATTTGGTG GTTTTCCAAA TACTGGTGGA GATTTATTTC TTCACATTAA ATCTGTAAAT ATGGACAATT GTTTTAGAGC TACTCAGGAT  TTTGCAAATC ATGAATTTAT TTCTCCATTG ATAAAGAAAA TTCAGGATGA AACCTATGCA TTCCTCCATA GAAGAAATAA GAAATCTGGT CTTGGAAGAG ATTTGAGTGG ATTCGAGGAT  GGAACTGAAA ATCCAAAAGA AATGGAAGAG AAAATTGAGG CAACCCTCAC CAATGAAAAG GATAGTTTCC TCTTGGCTCA GAAATGGGTT CACAATCTCA AATTTTTCAA TTCACTTTCA  TTGAAAGAAC AAGAGAATGA TATTGGAAGA ACGAAAGAGG ATAGCATCGA GTTGGAAAAT AAGCCAGAAA CTTCCCATGT GGCTCGTGTC ACTTTAGAAA AGGACGGAGA TGAAATTGAG  GTTGTGAGGC AATCAATGAG CTTTGGAAAT TCATCACAAC ATGGATTATT CTTCATTTCG TATGCAAACT CTGGAAAAAC CTTCATTCAT CAATTGGAGA GCATGGTTGG AAAGGGCGAA  TATGCCACTC CACAAGGTCA CAATGATCAT ATTATGAGAT TTTCCACTAA TATTTTAGGC TCGCTGTATT TTATTCCTTC TATTGGAACG TTATTGAAAA TGCGAGAGAA ATTGACAAGC 
TATAGACCTT CAAGGTTGTA A 

Retrieve as FASTA