Entry information : NgrGPx04
Entry ID 11096
Creation 2012-05-30 (Christophe Dunand)
Last sequence changes 2012-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-30 (Christophe Dunand)
Peroxidase information: NgrGPx04
Name NgrGPx04
Class Other glutathione peroxidase    [Orthogroup: Gpx4001]
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrGPx04
start..stop
S start..stop
NgrGPx07 181 8e-60 1..140 21..160
NgrGPx02 180 1e-59 1..140 22..161
BphGPx 177 1e-58 2..140 23..162
RpGPx_CGA009 176 6e-58 1..140 19..158
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 140813..141235 423  
join(140813..141235)


exon

Literature and cross-references NgrGPx04
DNA ref. GenBank:   GG738879.1 (140813..141235)
Protein sequence: NgrGPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   140
PWM (Da):   %s   15627.15  
PI (pH):   %s   9.98
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKNYSGKVLL IVNTASYCGF TPQLGSLQRL YERFKSRGFE VLAFPCNQFG AQEPGNKQEV CSFAAEKYNV SFTIFDKVKV NGKDAVPLFK FLKSQSKGFL TSDVKWNFTK FLVDRSGKVV 
GRYSPITDPE SIAPIIEKLF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGAATT ATTCTGGAAA AGTCTTGTTG ATTGTTAATA CTGCTAGTTA TTGTGGTTTT ACTCCACAAT TGGGATCTCT TCAGAGATTG TATGAAAGAT TTAAATCGAG AGGGTTTGAA  GTATTGGCTT TCCCTTGTAA TCAATTCGGA GCACAGGAGC CAGGAAATAA GCAAGAAGTT TGTTCATTTG CTGCTGAAAA GTACAATGTT TCGTTCACTA TATTTGATAA GGTTAAAGTG  AATGGAAAGG ATGCTGTGCC ATTATTTAAA TTCTTGAAGA GTCAATCTAA AGGATTTTTA ACTAGTGATG TAAAGTGGAA TTTCACCAAG TTCCTCGTGG ACAGAAGTGG AAAGGTTGTT 
GGAAGATATT CACCAATTAC TGATCCAGAA TCAATTGCAC CAATTATTGA AAAATTGTTC TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGAATT ATTCTGGAAA AGTCTTGTTG ATTGTTAATA CTGCTAGTTA TTGTGGTTTT ACTCCACAAT TGGGATCTCT TCAGAGATTG TATGAAAGAT TTAAATCGAG AGGGTTTGAA  GTATTGGCTT TCCCTTGTAA TCAATTCGGA GCACAGGAGC CAGGAAATAA GCAAGAAGTT TGTTCATTTG CTGCTGAAAA GTACAATGTT TCGTTCACTA TATTTGATAA GGTTAAAGTG  AATGGAAAGG ATGCTGTGCC ATTATTTAAA TTCTTGAAGA GTCAATCTAA AGGATTTTTA ACTAGTGATG TAAAGTGGAA TTTCACCAAG TTCCTCGTGG ACAGAAGTGG AAAGGTTGTT 
GGAAGATATT CACCAATTAC TGATCCAGAA TCAATTGCAC CAATTATTGA AAAATTGTTC TAA 

Retrieve as FASTA