Entry information : GinCcP02
Entry ID 11111
Creation 2012-06-04 (Christophe Dunand)
Last sequence changes 2015-03-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-03-19 (Christophe Dunand)
Peroxidase information: GinCcP02
Name GinCcP02
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Eukaryota Fungi Glomeromycota Glomeromycetes Glomeraceae Glomus
Organism Glomus intraradices (Rhizophagus irregularis)    [TaxId: 4876 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GinCcP02
start..stop
S start..stop
SpuCcP02 363 3e-128 4..266 2..267
CangCcP01 350 6e-123 3..265 6..272
BemeCcP 348 6e-122 3..264 5..269
BdeCcP02 343 4e-120 3..265 2..267
Literature and cross-references GinCcP02
DNA ref. JGI genome:   scaffold_21539 (8806..7737)
EST ref. GenBank:   GW104174.1 [5' end]   GW116958.1 [3' end]
Cluster/Prediction ref. JGI gene:   194565
Protein sequence: GinCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271
PWM (Da):   %s   30192.99  
PI (pH):   %s   5.23
Sequence
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Send to Peroxiscan
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MSTSGDYDAV REDIKQLIPN KDLSKDGLGP IFVRLAWHAS GTYDKNTKTG GSNGATMRFS LESSDAANNG LNIARDCLEP VKENHPWISY ADLWTLAGVV AIKELGGPTV PWKSGRVDAT  DESLVPPNGR LPNAEEGEQH VRDVFYRMGF NDREIVALIG AHCLGRCHKD RSGYEGAWTL TPTKFNNQFY VQLLKKNWST KELDNGIKQF KDENDRIMML PADMAFRTDP EFRKIVEEYA 
NDKETFFNDF AAAFGKLLEL GVPRSSGEAR L 

Retrieve as FASTA  
Remarks Complete sequence from 22 ESTs and genomic (3 introns).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCAACTT CAGGAGATTA CGATGCTGTA CGTGAAGATA TTAAACAACT TATTCCCAAT AAAGATTTGT CTAAAGATGG ACTTGGTCCA ATTTTTGTAC GTTTAGCATG GCACGCTTCT  GGAACTTATG ATAAGAACAC AAAAACCGGT GGTTCTAATG GAGCTACAAT GAGGTTTTCT CTTGAAAGTT CTGATGCTGC TAATAACGGT TTGAATATTG CACGAGATTG TTTAGAACCA  GTAAAGGAAA ACCATCCTTG GATTTCTTGT AAGTTTTCGT TGTTCTAGCA ACCATTATGG ATATGATTAA TTGACGAACC CCTCCGCGAG GTTTTTCATT AAGAAAAAAT GATTTTTTTT  GCATCAGATG CCGATCTTTG GACTCTTGCC GGTGTTGTTG CTATTAAGGA ATTAGGTGGA CCAACTGTTC CATGGAAATC TGGTCGTGTT GATGCCACCG ATGAAAGTTT AGTTCCACCC  AACGGTCGTC TTCCAAATGC CGAAGAAGGC GAACAACATG TTCGAGATGT TTTCTATCGT ATGGGATTCA ACGATCGGTT AGTATTTACA ATTTTGATAA TTTATGGATA ATAAAACAGT  TGCTGAATCT TCAATTTGAA AAATTTTAGT GAGATAGTTG CTCTCATTGG AGCTCATTGT CTCGGTCGAT GTCACAAAGA TCGCTCAGGA TATGAAGGTG CTTGGACCTT AACTCCGACA  AAATTTAATA ATCAATTGTA AGTATTAGAC AAAAGACAAA TCGATTTATT TTGGTCTATT AAAATATCTT TAATATTTAA ATAATCCAAT TTTTTTTTAG TTATGTTCAA TTATTAAAGA  AGAATTGGTC TACAAAAGAA TTAGATAACG GGATAAAACA ATTTAAAGAT GAAAATGATA GAATTATGAT GCTTCCAGCT GATATGGCAT TTCGCACGGA TCCGGAATTC AGAAAAATTG 
TTGAGGAATA TGCTAATGAT AAAGAAACAT TCTTTAATGA TTTCGCTGCG GCATTTGGAA AATTGTTGGA ACTTGGAGTT CCACGATCGA GTGGTGAGGC TCGATTATAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCAACTT CAGGAGATTA CGATGCTGTA CGTGAAGATA TTAAACAACT TATTCCCAAT AAAGATTTGT CTAAAGATGG ACTTGGTCCA ATTTTTGTAC GTTTAGCATG GCACGCTTCT  GGAACTTATG ATAAGAACAC AAAAACCGGT GGTTCTAATG GAGCTACAAT GAGGTTTTCT CTTGAAAGTT CTGATGCTGC TAATAACGGT TTGAATATTG CACGAGATTG TTTAGAACCA  GTAAAGGAAA ACCATCCTTG GATTTCTTAT GCCGATCTTT GGACTCTTGC CGGTGTTGTT GCTATTAAGG AATTAGGTGG ACCAACTGTT CCATGGAAAT CTGGTCGTGT TGATGCCACC  GATGAAAGTT TAGTTCCACC CAACGGTCGT CTTCCAAATG CCGAAGAAGG CGAACAACAT GTTCGAGATG TTTTCTATCG TATGGGATTC AACGATCGTG AGATAGTTGC TCTCATTGGA  GCTCATTGTC TCGGTCGATG TCACAAAGAT CGCTCAGGAT ATGAAGGTGC TTGGACCTTA ACTCCGACAA AATTTAATAA TCAATTTTAT GTTCAATTAT TAAAGAAGAA TTGGTCTACA  AAAGAATTAG ATAACGGGAT AAAACAATTT AAAGATGAAA ATGATAGAAT TATGATGCTT CCAGCTGATA TGGCATTTCG CACGGATCCG GAATTCAGAA AAATTGTTGA GGAATATGCT 
AATGATAAAG AAACATTCTT TAATGATTTC GCTGCGGCAT TTGGAAAATT GTTGGAACTT GGAGTTCCAC GATCGAGTGG TGAGGCTCGA TTATAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AACAAAAAAA AAACGCTTTA ATCATGTCAA CTTCAGGAGA TTACGATGCT GTACGTGAAG ATATTAAACA ACTTATTCCC AATAAAGATT TGTCTAAAGA TGGACTTGGT CCAATTTTTG  TACGTTTAGC ATGGCACGCT TCTGGAACTT ATGATAAGAA CACAAAAACC GGTGGTTCTA ATGGAGCTAC AATGAGGTTT TCTCTTGAAA GTTCTGATGC TGCTAATAAC GGTTTGAATA  TTGCACGAGA TTGTTTAGAA CCAGTAAAGG AAAACCATCC TTGGATTTCT TATGCCGATC TTTGGACTCT TGCCGGTGTT GTTGCTATTA AGGAATTAGG TGGACCAACT GTTCCATGGA  AATCTGGTCG TGTTGATGCC ACCGATGAAA GTTTAGTTCC ACCCAACGGT CGTCTTCCAA ATGCCGAAGA AGGCGAACAA CATGTTCGAG ATGTTTTCTA TCGTATGGGA TTCAACGATC  GTGAGATAGT TGCTCTCATT GGAGCTCATT GTCTCGGTCG ATGTCACAAA GATCGCTCAG GATATGAAGG TGCTTGGACC TTAACTCCGA CAAAATTTAA TAATCAATTT TATGTTCAAT  TATTAAAGAA GAATTGGTCT ACAAAAGAAT TAGATAACGG GATAAAACAA TTTAAAGATG AAAATGATAG AATTATGATG CTTCCAGCTG ATATGGCATT TCGCACGGAT CCGGAATTCA  GAAAAATTGT TGAGGAATAT GCTAATGATA AAGAAACATT CTTTAATGAT TTCGCTGCGG CATTTGGAAA ATTGTTGGAA CTTGGAGTTC CACGATCGAG TGGTGAGGCT CGATTATAAT 
TAATAAAATA TGATATTTTT AATAAAAAAT AATCTTTCGA TCGTCTTGTA TTATTTTCTA ACCCC 

Retrieve as FASTA