Entry information : Tmel2CysPrx
Entry ID 11115
Creation 2012-06-05 (Christophe Dunand)
Last sequence changes 2012-06-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-05 (Christophe Dunand)
Peroxidase information: Tmel2CysPrx
Name Tmel2CysPrx
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Fungi Ascomycota Pezizomycetes Tuberaceae Tuber
Organism Tuber melanosporum    [TaxId: 39416 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Tmel2CysPrx
start..stop
S start..stop
Pno2CysPrx 303 2e-106 3..196 10..205
Yl2CysPrx 301 6e-106 1..195 1..195
Dh2CysPrx 291 3e-102 1..195 1..195
Cal2CysPrx01 289 3e-101 1..195 1..195
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 730431..730500 70 N° 2 730629..730701 73 N° 3 730777..730786 10 N° 4 730849..730931 83
N° 5 730993..731167 175 N° 6 731227..731307 81 N° 7 731369..731467 99  
join(730431..730500,730629..730701,730777..730786,730849..730931,730993..731167, 731227..731307,731369..731467)


exon

Literature and cross-references Tmel2CysPrx
Protein ref. UniProtKB:   D5GI33
DNA ref. JGI genome:   scaffold_43 (730431..731467)
Cluster/Prediction ref. JGI gene:   4995
Protein sequence: Tmel2CysPrx
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196
PWM (Da):   %s   21560.02  
PI (pH):   %s   4.7
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVARVQHPAPPFKGTAVVEGGFEEISLKDYEGKWLILGFIPMAWTFVCPTIIAFSDAAKSFEERGASIVFASVDSEYSLLAWSSTERKDGGLGNINIPLFSDKNHKLAGDYGVLIEEEGVALRGLFIIDPKGTIRITINDLPVGRSVDETLRLVDAFKFTEKYGEVCPANWNQGGETIKANPKESKEYFNKVHG*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCGCTCGTGTCCAACACCCTGCTCCTCCTTTCAAGGGAACTGCCGTCGTTGAAGGTGGCTTCGAAGGTAGGTTTGTCAAGTATTTTGCCCCTTTTGAGAGGTGACACCTTCTTGAG
AGCTTGAACCAACTTTCCTAAGAAGGTGACTCCTTTTGGGTGATACGGGGCTTAGGGATGCTAACTTGCCTTTGATAGAAATTTCACTTAAGGATTATGAGGGAAAGTGGCTCATTCTTG
GCTTTATCCCCATGGCCTGGACTTTTGTTTG
GTATGTGGCCTCCTTCGTGAAGTTTGAACATTGTTCAGTGGGATCTGCCACTAACTTTTGCTTTGCCATCTTCAGCCCGACTGAAGTCA
GTCGACCCTTCTACACCTGTGGGTCGGTTGAAAGCCGAAGCTAAACATCATTTTACAGATCATTGCTTTTTCTGATGCTGCCAAATCCTTCGAGGAGCGTGGTGCCTCAATTGTCTTCGC
TTCTGTGGATTCTGAGTATAG
GTGGGTGTAGTCGCGCTTGTTACTGATTGGACGGTTAGGATGGCAGCTGACGACGTTGCAGCTTGCTAGCTTGGTCCAGTACTGAGCGTAAAGACGGAG
GTCTCGGAAATATCAACATTCCCTTGTTCAGTGACAAGAACCATAAGCTTGCTGGGGATTATGGAGTTTTGATCGAAGAGGAAGGAGTTGCCCTCAGGGGTTTGTTCATTATCGATCCCA
AGGGAACGATTAGACAA
GTAAGCACATATGACTTGTTCAGATATTCTGTATGGTGACTAATATGGGTAATTTTTAGATCACTATCAACGATCTTCCTGTCGGAAGGTCTGTTGACGAAAC
CCTTCGCCTTGTCGATGCTTTCAAGTTCACTGAAAAG
GTATTATGAAGCACTTCTACCACCAACCTAGTATATGGAGACTGACATAGCACACGCACAGTATGGTGAGGTCTGCCCTGCCA
ATTGGAACCAGGGAGGCGAAACTATCAAGGCCAATCCTAAGGAATCGAAGGAGTATTTCAACAAGGTCCATGGTTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCGCTCGTGTCCAACACCCTGCTCCTCCTTTCAAGGGAACTGCCGTCGTTGAAGGTGGCTTCGAAGAAATTTCACTTAAGGATTATGAGGGAAAGTGGCTCATTCTTGGCTTTATC
CCCATGGCCTGGACTTTTGTTTG
CCCGACTGAAATCATTGCTTTTTCTGATGCTGCCAAATCCTTCGAGGAGCGTGGTGCCTCAATTGTCTTCGCTTCTGTGGATTCTGAGTATAGCTTG
CTAGCTTGGTCCAGTACTGAGCGTAAAGACGGAGGTCTCGGAAATATCAACATTCCCTTGTTCAGTGACAAGAACCATAAGCTTGCTGGGGATTATGGAGTTTTGATCGAAGAGGAAGGA
GTTGCCCTCAGGGGTTTGTTCATTATCGATCCCAAGGGAACGATTAGACAA
ATCACTATCAACGATCTTCCTGTCGGAAGGTCTGTTGACGAAACCCTTCGCCTTGTCGATGCTTTCAAG
TTCACTGAAAAG
TATGGTGAGGTCTGCCCTGCCAATTGGAACCAGGGAGGCGAAACTATCAAGGCCAATCCTAAGGAATCGAAGGAGTATTTCAACAAGGTCCATGGTTAG

Retrieve as FASTA