Entry information : MpopCcP01
Entry ID 11122
Creation 2012-06-06 (Christophe Dunand)
Last sequence changes 2012-06-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-04-09 (Christophe Dunand)
Peroxidase information: MpopCcP01
Name MpopCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella
Organism Mycosphaerella populorum (Septoria musiva)    [TaxId: 85929 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpopCcP01
start..stop
S start..stop
SpopCcP01 577 0 8..315 7..314
BcomCcP 501 1e-180 7..323 4..319
MpiCcP01 493 1e-177 7..333 4..322
ZcelCcP01 492 2e-177 11..323 9..320
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 58087..59088 1002  
complement(join(58087..59088))


exon

Literature and cross-references MpopCcP01
DNA ref. JGI genome:   scaffold_4 (59088..58087)
Cluster/Prediction ref. JGI gene:   148441
Protein sequence: MpopCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334
PWM (Da):   %s   37338.43  
PI (pH):   %s   5.47
Sequence
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Send to Peroxiscan
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MSQPISPSLL SSIKQDIHTL LTQPTYDDGS AGPILVRLAW HSCGTYSLTT DTGGSNGAGM RYEAEGGDPA NAGLQHARVF LEPIKSRYGQ HITYSDLWTL AGVVAVEAMG GPRCEWKGGR  TDFVDDSKLP PRGRLPDGAK GSEHLRDVFY RMGFGDQEIV ALSGAHNLGR CHADRSGFEG AWVNSPTRFS NTYFKLMISE EWKEKVLENG TRQFVHYDED SGEELMMLPT DLALVQDESF 
RPWVELYARD KERFFADFAK AFAKLLELGI VRDENDRVVN SDNVKGGYHS APKKSNRPGK PEEVDRYGEA EPLRKENEEF QKQQQQPEIR SRL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCAAC CCATCTCCCC CTCCCTCCTC TCCTCCATAA AACAAGACAT CCACACCCTC CTCACCCAAC CCACCTACGA CGACGGCAGC GCGGGCCCCA TCCTCGTGCG TCTCGCCTGG  CACAGCTGCG GAACCTACTC CCTCACAACC GACACAGGCG GCAGCAACGG CGCAGGAATG CGCTACGAAG CCGAAGGCGG CGACCCGGCC AACGCCGGTC TGCAACACGC TCGCGTCTTC  CTCGAACCGA TCAAATCCCG CTACGGCCAG CACATTACGT ATTCGGATTT GTGGACGTTG GCGGGCGTCG TGGCTGTGGA AGCTATGGGT GGACCGCGAT GCGAATGGAA AGGCGGCAGG  ACGGATTTTG TGGATGATAG TAAACTTCCT CCGAGAGGGA GATTGCCTGA TGGGGCGAAG GGGAGTGAGC ATTTGAGAGA CGTGTTTTAT CGAATGGGGT TTGGGGATCA GGAAATTGTG  GCGCTGTCGG GTGCGCATAA TTTGGGGAGA TGTCATGCCG ATCGATCGGG GTTTGAGGGT GCCTGGGTGA ATTCTCCCAC GAGGTTTTCG AATACCTATT TTAAATTGAT GATTTCCGAG  GAGTGGAAGG AGAAGGTCTT GGAGAATGGG ACAAGACAGT TTGTGCATTA TGATGAGGAC TCCGGGGAGG AATTGATGAT GCTGCCCACG GATTTGGCGC TCGTGCAGGA TGAGAGCTTT  CGGCCGTGGG TGGAGCTGTA TGCTCGGGAT AAGGAGAGGT TCTTTGCGGA CTTTGCCAAG GCTTTTGCAA AGTTGTTGGA ACTGGGCATT GTACGAGACG AGAACGACCG GGTGGTCAAT  TCGGATAATG TCAAGGGCGG ATATCACAGT GCACCCAAGA AGAGCAATCG GCCAGGAAAG CCAGAGGAGG TGGATCGATA TGGCGAGGCC GAGCCTCTGA GGAAAGAGAA TGAAGAGTTT 
CAGAAGCAGC AGCAGCAGCC AGAGATACGA TCGAGGTTGT AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCAAC CCATCTCCCC CTCCCTCCTC TCCTCCATAA AACAAGACAT CCACACCCTC CTCACCCAAC CCACCTACGA CGACGGCAGC GCGGGCCCCA TCCTCGTGCG TCTCGCCTGG  CACAGCTGCG GAACCTACTC CCTCACAACC GACACAGGCG GCAGCAACGG CGCAGGAATG CGCTACGAAG CCGAAGGCGG CGACCCGGCC AACGCCGGTC TGCAACACGC TCGCGTCTTC  CTCGAACCGA TCAAATCCCG CTACGGCCAG CACATTACGT ATTCGGATTT GTGGACGTTG GCGGGCGTCG TGGCTGTGGA AGCTATGGGT GGACCGCGAT GCGAATGGAA AGGCGGCAGG  ACGGATTTTG TGGATGATAG TAAACTTCCT CCGAGAGGGA GATTGCCTGA TGGGGCGAAG GGGAGTGAGC ATTTGAGAGA CGTGTTTTAT CGAATGGGGT TTGGGGATCA GGAAATTGTG  GCGCTGTCGG GTGCGCATAA TTTGGGGAGA TGTCATGCCG ATCGATCGGG GTTTGAGGGT GCCTGGGTGA ATTCTCCCAC GAGGTTTTCG AATACCTATT TTAAATTGAT GATTTCCGAG  GAGTGGAAGG AGAAGGTCTT GGAGAATGGG ACAAGACAGT TTGTGCATTA TGATGAGGAC TCCGGGGAGG AATTGATGAT GCTGCCCACG GATTTGGCGC TCGTGCAGGA TGAGAGCTTT  CGGCCGTGGG TGGAGCTGTA TGCTCGGGAT AAGGAGAGGT TCTTTGCGGA CTTTGCCAAG GCTTTTGCAA AGTTGTTGGA ACTGGGCATT GTACGAGACG AGAACGACCG GGTGGTCAAT  TCGGATAATG TCAAGGGCGG ATATCACAGT GCACCCAAGA AGAGCAATCG GCCAGGAAAG CCAGAGGAGG TGGATCGATA TGGCGAGGCC GAGCCTCTGA GGAAAGAGAA TGAAGAGTTT 
CAGAAGCAGC AGCAGCAGCC AGAGATACGA TCGAGGTTGT AG 

Retrieve as FASTA