Entry information : Esil2CysPrx (ycf42)
Entry ID 11136
Creation 2012-06-08 (Catherine Mathe)
Last sequence changes 2012-06-08 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-11 (Christophe Dunand)
Peroxidase information: Esil2CysPrx (ycf42)
Name (synonym) Esil2CysPrx (ycf42)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Phaeophyceae Ectocarpaceae Ectocarpus
Organism Ectocarpus siliculosus    [TaxId: 2880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Esil2CysPrx
start..stop
S start..stop
Fve2CysPrx 314 2e-111 1..186 1..186
Ppur2CysPrx 279 3e-97 3..185 5..186
Py2CysPrx 275 1e-95 4..185 6..186
Mvi2CysPrx 274 3e-95 4..184 16..196
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 62660..63220 561  
complement(join(62660..63220))


exon

Literature and cross-references Esil2CysPrx (ycf42)
Literature Le Corguille,G., Pearson,G., Valente,M., Viegas,C., Gschloessl,B., Corre,E., Bailly,X., Peters,A.F., Jubin,C., Vacherie,B., Cock,J.M. and Leblanc,C.
Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids. BMC Evol. Biol. 9, 253 (2009)
Protein ref. GenPept:   YP_003289214.1
DNA ref. GenBank:   NC_013498.1 (63220..62660)
Protein sequence: Esil2CysPrx (ycf42)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   21220.55 Transmb domain:   %s   i38-60o
PI (pH):   %s   4.14
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNNNNVQVGE IAPDFETVAI YDEESYNIRL SDYRKKKYVV LFFYPLNFTF VCPTEITAFS DRFEEFSSLD TEVLGVSVDS EYSHLLWTQT KREEGGVGLL NYPLVSDIKK EISNSYNILH 
DSGVALRGLF IIDKKGIIQY STTNNLSFGR SVDETLRILQ AIQYITENPD EVCPSDWEPG DETISL* 

Retrieve as FASTA  
Remarks Complete sequence coded on chloroplastic genome (no intron). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATAATA ATAATGTACA AGTAGGGGAA ATCGCTCCGG ACTTTGAAAC AGTAGCAATT TATGATGAGG AAAGTTATAA TATACGATTA TCAGATTATC GTAAAAAAAA GTATGTGGTT  CTATTTTTTT ACCCATTAAA TTTTACTTTT GTTTGCCCGA CAGAAATAAC AGCATTCAGT GATCGATTCG AAGAATTTAG TTCCCTGGAT ACGGAAGTTT TAGGGGTTTC AGTCGACAGT  GAATATTCAC ATTTATTATG GACTCAGACT AAACGTGAAG AAGGTGGTGT TGGATTATTA AATTACCCTT TAGTTTCTGA TATAAAAAAG GAAATTAGCA ATTCTTATAA TATTTTACAT  GATTCAGGTG TTGCTCTAAG AGGCCTATTT ATTATTGATA AAAAAGGTAT TATTCAGTAT TCAACAACTA ATAATTTATC TTTTGGACGT AGTGTGGATG AAACTTTAAG AATTTTACAA 
GCAATCCAAT ATATAACAGA AAATCCTGAC GAGGTTTGTC CAAGTGATTG GGAACCTGGT GATGAAACAA TCTCTCTCTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATAATA ATAATGTACA AGTAGGGGAA ATCGCTCCGG ACTTTGAAAC AGTAGCAATT TATGATGAGG AAAGTTATAA TATACGATTA TCAGATTATC GTAAAAAAAA GTATGTGGTT  CTATTTTTTT ACCCATTAAA TTTTACTTTT GTTTGCCCGA CAGAAATAAC AGCATTCAGT GATCGATTCG AAGAATTTAG TTCCCTGGAT ACGGAAGTTT TAGGGGTTTC AGTCGACAGT  GAATATTCAC ATTTATTATG GACTCAGACT AAACGTGAAG AAGGTGGTGT TGGATTATTA AATTACCCTT TAGTTTCTGA TATAAAAAAG GAAATTAGCA ATTCTTATAA TATTTTACAT  GATTCAGGTG TTGCTCTAAG AGGCCTATTT ATTATTGATA AAAAAGGTAT TATTCAGTAT TCAACAACTA ATAATTTATC TTTTGGACGT AGTGTGGATG AAACTTTAAG AATTTTACAA 
GCAATCCAAT ATATAACAGA AAATCCTGAC GAGGTTTGTC CAAGTGATTG GGAACCTGGT GATGAAACAA TCTCTCTCTA A 

Retrieve as FASTA