Entry information : Hak2CysPrx (ycf42)
Entry ID 11144
Creation 2012-06-08 (Catherine Mathe)
Last sequence changes 2012-06-08 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-11 (Christophe Dunand)
Peroxidase information: Hak2CysPrx (ycf42)
Name (synonym) Hak2CysPrx (ycf42)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Raphidophyceae Chattonellaceae Heterosigma
Organism Heterosigma akashiwo    [TaxId: 2829 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Hak2CysPrx
start..stop
S start..stop
NOspAhpC 300 2e-105 2..195 10..203
Mvi2CysPrx 299 6e-105 5..195 20..210
NOazAhpC 298 1e-104 3..195 11..203
NOpuAhpC 297 2e-104 2..195 10..203
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 59188..59775 588  
join(59188..59775)


exon

Literature and cross-references Hak2CysPrx (ycf42)
Literature Duplessis,M.R., Karol,K.G., Adman,E.T., Choi,L.Y., Jacobs,M.A. and Cattolico,R.A. Chloroplast His-to-Asp signal transduction: a potential mechanism for plastid gene regulation in Heterosigma akashiwo (Raphidophyceae). BMC Evol. Biol. 7, 70 (2007)
Protein ref. GenPept:   ABV70099.1
DNA ref. GenBank:   EU168191.1 (59188..59775)
Protein sequence: Hak2CysPrx (ycf42)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196
PWM (Da):   %s   21980.25  
PI (pH):   %s   4.64
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTIKVGSIAP LFTATSVFEQ EFSTTKLIDY REKKYVLLFF YPLDFTFVCP TEITAFSDRF EEFQALNTEI LGVSIDSEYA HLAWTQTPRK AGGVGDLAYP LVSDVKREIC LSYGVLNKDL 
VALRALFIID KDGIIQHSTV NNLSFGRSVD EALRTLQAIQ YIQSNPDEVC PVNWKPGEKT MKPDPTESKV FFDSV* 

Retrieve as FASTA  
Remarks Complete sequence coded on chloroplastic genome (no intron). No EST available.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTATTA AAGTAGGATC AATAGCTCCA CTTTTTACCG CAACATCTGT TTTCGAACAG GAATTTTCAA CTACTAAGTT AATTGATTAT CGCGAAAAAA AATATGTGCT TTTATTTTTT  TATCCATTAG ACTTCACTTT TGTTTGTCCA ACTGAAATTA CAGCTTTTAG TGATCGCTTT GAAGAATTTC AAGCTTTAAA TACAGAAATT TTAGGAGTTT CAATAGATAG TGAATATGCT  CATCTGGCGT GGACCCAAAC ACCTAGAAAA GCAGGTGGAG TTGGGGATTT AGCTTATCCC CTAGTTTCAG ATGTAAAACG TGAAATTTGT TTATCTTATG GTGTTTTAAA CAAAGATCTC  GTTGCTTTAC GGGCATTATT TATTATTGAT AAAGATGGCA TTATTCAACA CTCAACTGTA AATAATTTGT CGTTTGGTAG AAGTGTAGAT GAAGCGCTGC GAACATTACA AGCAATTCAG 
TATATTCAGT CAAATCCAGA CGAAGTTTGT CCAGTTAATT GGAAACCTGG CGAGAAAACA ATGAAGCCAG ACCCAACTGA ATCAAAAGTT TTCTTTGATT CAGTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTATTA AAGTAGGATC AATAGCTCCA CTTTTTACCG CAACATCTGT TTTCGAACAG GAATTTTCAA CTACTAAGTT AATTGATTAT CGCGAAAAAA AATATGTGCT TTTATTTTTT  TATCCATTAG ACTTCACTTT TGTTTGTCCA ACTGAAATTA CAGCTTTTAG TGATCGCTTT GAAGAATTTC AAGCTTTAAA TACAGAAATT TTAGGAGTTT CAATAGATAG TGAATATGCT  CATCTGGCGT GGACCCAAAC ACCTAGAAAA GCAGGTGGAG TTGGGGATTT AGCTTATCCC CTAGTTTCAG ATGTAAAACG TGAAATTTGT TTATCTTATG GTGTTTTAAA CAAAGATCTC  GTTGCTTTAC GGGCATTATT TATTATTGAT AAAGATGGCA TTATTCAACA CTCAACTGTA AATAATTTGT CGTTTGGTAG AAGTGTAGAT GAAGCGCTGC GAACATTACA AGCAATTCAG 
TATATTCAGT CAAATCCAGA CGAAGTTTGT CCAGTTAATT GGAAACCTGG CGAGAAAACA ATGAAGCCAG ACCCAACTGA ATCAAAAGTT TTCTTTGATT CAGTTTAA 

Retrieve as FASTA