Entry information : PmariAPx01
Entry ID 11145
Creation 2012-06-11 (Christophe Dunand)
Last sequence changes 2012-06-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-11 (Christophe Dunand)
Peroxidase information: PmariAPx01
Name PmariAPx01
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Perkinsidae Perkinsus
Organism Perkinsus marinus    [TaxId: 31276 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmariAPx01
start..stop
S start..stop
PmariAPx02 524 0 5..297 38..329
GtAPx02 290 2e-97 23..297 80..364
BdiAPx05 283 2e-95 12..297 47..313
TaAPx02 282 9e-95 10..289 78..338
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 62161..63054 894  
complement(join(62161..63054))


exon

Literature and cross-references PmariAPx01
DNA ref. GenBank:   GG685288.1 (63054..62161)
EST ref. GenBank:   EH062259.1 [5' end]   EH070464.1 [3' end]
Protein sequence: PmariAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   297
PWM (Da):   %s   32809.12  
PI (pH):   %s   4.79
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVQSDPKQYA KDLHAMADDL TAMIDELNCD PIIVRFAWHD SGTYDKSLPW PECGGANGGI RFDAELKHEA NAGLAKGRRF LEPIKAKYPG VSWADTIQLA SACALKHCGG PDILPNMKFG  RKDISGPEEC PPEGRLPSPD GAADHLRKIF YRMGFNDQEI VALSGGHTIG RAFKDRSGTV EEAAGRGTQY TNGSEVARLD GKEGIGMKGG RSWCRKWLKF DNEYFINIME DAKKDSDEDN 
GLLVLKTDNA LVTDPFFREY VELYAEDNDK FLEDYEKAHI KLSELGSEFI VDGGIKM 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTACAGA GTGATCCCAA GCAATACGCC AAAGACCTCC ATGCCATGGC AGATGATCTC ACTGCCATGA TTGACGAGCT GAACTGTGAT CCCATCATTG TCCGTTTTGC TTGGCACGAC  AGTGGGACTT ATGATAAGTC CCTCCCTTGG CCGGAGTGTG GTGGGGCCAA TGGTGGAATC AGATTTGATG CCGAACTCAA GCATGAGGCA AATGCTGGGT TGGCCAAAGG TCGAAGATTC  CTCGAGCCCA TTAAGGCCAA GTACCCCGGT GTGTCTTGGG CCGATACCAT CCAGTTGGCA TCGGCATGCG CCTTGAAACA CTGTGGGGGG CCTGACATTC TCCCCAATAT GAAGTTCGGC  AGGAAGGACA TCTCTGGTCC TGAGGAGTGT CCTCCCGAAG GGAGACTCCC CAGCCCTGAC GGCGCCGCCG ACCATTTGAG GAAGATCTTC TACCGTATGG GCTTCAATGA TCAGGAGATT  GTCGCTCTTT CTGGTGGTCA TACTATCGGT AGGGCCTTCA AAGATCGTTC TGGCACGGTT GAGGAGGCTG CTGGACGCGG TACTCAATAC ACCAACGGCA GCGAGGTGGC TCGTCTTGAT  GGAAAGGAGG GTATCGGTAT GAAGGGCGGC CGCTCTTGGT GCAGGAAATG GCTCAAGTTT GATAATGAGT ACTTCATCAA CATCATGGAG GATGCCAAAA AGGACTCCGA TGAGGACAAC  GGCTTGCTGG TGCTGAAGAC CGATAACGCT CTTGTCACAG ATCCTTTCTT CAGAGAATAT GTTGAACTTT ATGCAGAGGA TAATGATAAG TTTTTAGAGG ACTATGAGAA GGCTCATATC 
AAGCTGAGCG AGCTCGGTTC TGAGTTCATC GTAGATGGTG GCATCAAAAT GTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTACAGA GTGATCCCAA GCAATACGCC AAAGACCTCC ATGCCATGGC AGATGATCTC ACTGCCATGA TTGACGAGCT GAACTGTGAT CCCATCATTG TCCGTTTTGC TTGGCACGAC  AGTGGGACTT ATGATAAGTC CCTCCCTTGG CCGGAGTGTG GTGGGGCCAA TGGTGGAATC AGATTTGATG CCGAACTCAA GCATGAGGCA AATGCTGGGT TGGCCAAAGG TCGAAGATTC  CTCGAGCCCA TTAAGGCCAA GTACCCCGGT GTGTCTTGGG CCGATACCAT CCAGTTGGCA TCGGCATGCG CCTTGAAACA CTGTGGGGGG CCTGACATTC TCCCCAATAT GAAGTTCGGC  AGGAAGGACA TCTCTGGTCC TGAGGAGTGT CCTCCCGAAG GGAGACTCCC CAGCCCTGAC GGCGCCGCCG ACCATTTGAG GAAGATCTTC TACCGTATGG GCTTCAATGA TCAGGAGATT  GTCGCTCTTT CTGGTGGTCA TACTATCGGT AGGGCCTTCA AAGATCGTTC TGGCACGGTT GAGGAGGCTG CTGGACGCGG TACTCAATAC ACCAACGGCA GCGAGGTGGC TCGTCTTGAT  GGAAAGGAGG GTATCGGTAT GAAGGGCGGC CGCTCTTGGT GCAGGAAATG GCTCAAGTTT GATAATGAGT ACTTCATCAA CATCATGGAG GATGCCAAAA AGGACTCCGA TGAGGACAAC  GGCTTGCTGG TGCTGAAGAC CGATAACGCT CTTGTCACAG ATCCTTTCTT CAGAGAATAT GTTGAACTTT ATGCAGAGGA TAATGATAAG TTTTTAGAGG ACTATGAGAA GGCTCATATC 
AAGCTGAGCG AGCTCGGTTC TGAGTTCATC GTAGATGGTG GCATCAAAAT GTGA 

Retrieve as FASTA