Entry information : PmariAPx02
Entry ID 11146
Creation 2012-06-11 (Christophe Dunand)
Last sequence changes 2012-06-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-11 (Christophe Dunand)
Peroxidase information: PmariAPx02
Name PmariAPx02
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Perkinsidae Perkinsus
Organism Perkinsus marinus    [TaxId: 31276 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmariAPx02
start..stop
S start..stop
PmariAPx01 524 0 38..329 5..297
GtAPx02 286 2e-95 11..329 40..364
PbAPx04 278 7e-93 27..327 18..296
PtAPx08 279 3e-92 27..327 62..340
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 50408..51397 990  
complement(join(50408..51397))


exon

Literature and cross-references PmariAPx02
DNA ref. GenBank:   GG685288.1 (51397..50408)
EST ref. GenBank:   EH071186.1 [5' end]
Protein sequence: PmariAPx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   35568.64  
PI (pH):   %s   7.6
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGNICDSCRG STSRPVPAAA SNSQSARAAT TTVGGAVDKV QYAKDIRAMA DELTAMIDRL NCDPIIVRFA WHDSGTYDKS LPWPQCGGAS GGIIYDVELS DAANAGLPKA LKFLQPIKAK  YPGVSWADTI QLASACALKH CGGPDIIPYM KFGRKDISGP EECPPAGRLP MPEGADHLRK IFYRMGFNDQ EIVALSGGHT IGRAFKDRSG TVEEAAGRGT QYTNGSEVAR LDGKEGIGMK 
GGRSWCRKWL KFDNEYFINI MEDAKSKSKV DNGLLVLKSD NCLVTDPSFR PYVEVYAKDN NKFLCDYAQA HIKLSELGCQ YIVDGGIKV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 2 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAACA TCTGTGACTC CTGCAGAGGC AGCACTTCTA GACCCGTGCC CGCGGCAGCT TCCAACAGTC AGTCGGCGAG GGCAGCCACT ACCACCGTTG GTGGGGCCGT TGACAAAGTG  CAGTATGCTA AGGACATCAG AGCAATGGCG GACGAGTTGA CTGCCATGAT CGATAGGCTG AACTGTGATC CCATCATTGT CCGTTTCGCC TGGCACGACA GTGGGACTTA TGATAAGTCT  CTGCCTTGGC CGCAGTGTGG TGGGGCCAGC GGCGGCATCA TCTATGATGT AGAGCTGTCT GACGCTGCCA ACGCGGGGCT TCCGAAGGCG CTGAAGTTCC TTCAGCCGAT TAAGGCCAAG  TACCCCGGTG TGTCTTGGGC CGATACCATC CAGTTGGCAT CGGCATGCGC CTTGAAACAC TGTGGGGGGC CTGATATTAT TCCTTATATG AAGTTCGGCA GGAAGGACAT CTCCGGTCCT  GAGGAGTGCC CCCCAGCTGG GAGGCTTCCT ATGCCTGAAG GCGCCGACCA TTTGAGGAAG ATCTTCTACC GTATGGGCTT CAATGATCAG GAGATTGTCG CTCTTTCTGG TGGTCATACT  ATCGGTAGGG CCTTTAAAGA TCGTTCTGGC ACGGTTGAGG AGGCTGCTGG GCGCGGTACT CAATACACCA ACGGCAGCGA GGTGGCTCGT CTTGATGGAA AGGAGGGTAT CGGTATGAAG  GGTGGTCGTT CTTGGTGCAG GAAATGGCTC AAGTTTGACA ATGAGTACTT CATCAACATC ATGGAGGATG CTAAGTCCAA GAGCAAGGTT GATAACGGTC TCCTTGTCCT CAAAAGTGAC  AATTGCCTTG TCACGGATCC GTCGTTCAGG CCATACGTCG AGGTCTATGC TAAGGACAAC AACAAGTTCC TCTGCGACTA CGCCCAAGCA CACATAAAGC TGAGCGAGCT CGGTTGCCAA 
TATATTGTTG ACGGTGGGAT CAAGGTATGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAACA TCTGTGACTC CTGCAGAGGC AGCACTTCTA GACCCGTGCC CGCGGCAGCT TCCAACAGTC AGTCGGCGAG GGCAGCCACT ACCACCGTTG GTGGGGCCGT TGACAAAGTG  CAGTATGCTA AGGACATCAG AGCAATGGCG GACGAGTTGA CTGCCATGAT CGATAGGCTG AACTGTGATC CCATCATTGT CCGTTTCGCC TGGCACGACA GTGGGACTTA TGATAAGTCT  CTGCCTTGGC CGCAGTGTGG TGGGGCCAGC GGCGGCATCA TCTATGATGT AGAGCTGTCT GACGCTGCCA ACGCGGGGCT TCCGAAGGCG CTGAAGTTCC TTCAGCCGAT TAAGGCCAAG  TACCCCGGTG TGTCTTGGGC CGATACCATC CAGTTGGCAT CGGCATGCGC CTTGAAACAC TGTGGGGGGC CTGATATTAT TCCTTATATG AAGTTCGGCA GGAAGGACAT CTCCGGTCCT  GAGGAGTGCC CCCCAGCTGG GAGGCTTCCT ATGCCTGAAG GCGCCGACCA TTTGAGGAAG ATCTTCTACC GTATGGGCTT CAATGATCAG GAGATTGTCG CTCTTTCTGG TGGTCATACT  ATCGGTAGGG CCTTTAAAGA TCGTTCTGGC ACGGTTGAGG AGGCTGCTGG GCGCGGTACT CAATACACCA ACGGCAGCGA GGTGGCTCGT CTTGATGGAA AGGAGGGTAT CGGTATGAAG  GGTGGTCGTT CTTGGTGCAG GAAATGGCTC AAGTTTGACA ATGAGTACTT CATCAACATC ATGGAGGATG CTAAGTCCAA GAGCAAGGTT GATAACGGTC TCCTTGTCCT CAAAAGTGAC  AATTGCCTTG TCACGGATCC GTCGTTCAGG CCATACGTCG AGGTCTATGC TAAGGACAAC AACAAGTTCC TCTGCGACTA CGCCCAAGCA CACATAAAGC TGAGCGAGCT CGGTTGCCAA 
TATATTGTTG ACGGTGGGAT CAAGGTATGA 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTCAAGT TTGTATTCGA GTCGTCCTTC ATCCATGGGA AACATCTGTG ACTCCTGCAG AGGCAGCACT TCTAGACCCG TGCCCGCGGC AGCTTCCAAC AGTCAGTCGG CGAGGGCAGC  CACTACCACC GTTGGTGGGG CCGTTGACAA AGTGCAGTAT GCTAAGGACA TCAGAGCAAT GGCGGACGAG TTGACTGCCA TGATCGATAG GCTGAACTGT GATCCCATCA TTGTCCGTTT  CGCCTGGCAC GACAGTGGGA CTTATGATAA GTCTCTGCCT TGGCCGCAGT GTGGTGGGGC CAGCGGCGGC ATCATCTATG ATGTAGAGCT GTCTGACGCT GCCAACGCGG GGCTTCCGAA  GGCGCTGAAG TTCCTTCAGC CGATTAAGGC CAAGTACCCC GGTGTGTCCT GGGCCGATAC CATCCAGCTG GCATCGGCAT GCGCCTTGAA ACACTGTGGG GGGCCTGATA TTATTCCTTA  TATGAAGTTT GGCAGGAAGG ACATCTCCGG TCCTGAGGAG TGCCCCCCAG CTGGGAGGCT TCCTATGCCT GAAGGCGCCG ACCATTTGAG GAAGATCTTC TACCGTATGG GCTTCAATGA  TCAGGAGATT GTCGCTCTTT CTGGTGGTCA TACTATCGGT AGGGCCTTCA AAGATCGTTC TGGCACGGTT GAGGAGGCTG CTGGGCGCGG TACTCAATAC ACCAACGGTA GCGAGGTGGC  TCGTCTTGAT GGAAAGGAGG GTATCGGTAT GGAAGGGTGG TCGTTCTTGG TGCAGGAAAT GGCTCAAGTT TGACAATGAG TACTTCATCA ACATCATGGA GGATGCTAAG TCCAAGAGCA  AGGTTGATAA CGGTCTCCTT GTCCTCAAAA GTGACAATTG CCTTGTCACG GATCCGTCGT TCAGGCCATA CGTCGAGGTC TATGCTAAGG ACAACAACAA GTTCCTCTGC GACTACGCCC 
AAGCACACAT AAAGCTGAGC GAGCTCGGTT GCCAATATAT TGTTGACGGT GGGATCAAGG TATGA 

Retrieve as FASTA