Entry information : Py2CysPrx (ycf42)
Entry ID 11149
Creation 2012-06-12 (Catherine Mathe)
Last sequence changes 2012-06-12 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-13 (Christophe Dunand)
Peroxidase information: Py2CysPrx (ycf42)
Name (synonym) Py2CysPrx (ycf42)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Bangiophyceae Bangiaceae Porphyra
Organism Porphyra yezoensis    [TaxId: 2788 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Py2CysPrx
start..stop
S start..stop
Ppur2CysPrx 388 2e-140 1..199 1..199
NOazAhpC 332 4e-118 6..198 9..202
NOpuAhpC 330 4e-117 8..198 11..202
NOspAhpC 328 2e-116 8..198 11..202
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 77394..77993 600  
complement(join(77394..77993))


exon

Literature and cross-references Py2CysPrx (ycf42)
Protein ref. UniProtKB:   Q1XDL4
DNA ref. GenBank:   AP006715.1 (77993..77394)
Protein sequence: Py2CysPrx (ycf42)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   200
PWM (Da):   %s   22167.16  
PI (pH):   %s   4.5
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MISGPNCLRV GQLAPDFSAT AVYDQEFKTL KLSDLKNKYI VLFFYPLDFT FVCPTEITAF SDKYNAFSEL NTEVLGVSVD SEYSHLAWLQ TDRESGGLGD LSYPLVSDLK KEISAAYNVL 
NSDGVALRGL FIIDPKGIIQ YSTINNLEFG RSVEETLRVL QAIQYVQSHP DEVCPANWKP GDKTMNPDPI KSKNYFAAA* 

Retrieve as FASTA  
Remarks Complete sequence coded on chloroplastic genome (no intron). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATTTCTG GACCAAATTG TCTTCGAGTA GGTCAGCTAG CTCCTGATTT TTCAGCTACA GCTGTTTATG ACCAAGAATT TAAAACGTTA AAATTATCTG ATCTCAAGAA TAAGTATATT  GTCTTATTCT TTTATCCTTT AGATTTTACA TTTGTGTGCC CTACAGAAAT TACAGCATTT AGCGATAAGT ATAATGCTTT TTCGGAACTT AATACAGAAG TTCTTGGAGT CTCGGTTGAT  AGTGAGTATT CTCATCTTGC TTGGTTACAG ACTGACAGAG AATCAGGTGG ATTAGGAGAT CTTTCATATC CATTAGTATC AGACTTAAAA AAAGAGATCA GTGCAGCTTA TAATGTTTTG  AATAGTGATG GTGTAGCTCT AAGAGGACTA TTTATTATAG ACCCGAAAGG AATTATTCAG TACTCTACAA TCAATAATCT AGAGTTTGGC AGGAGTGTAG AAGAAACTTT GAGGGTTTTA  CAAGCAATTC AATATGTACA ATCTCATCCA GATGAAGTTT GTCCAGCTAA TTGGAAGCCT GGTGACAAAA CAATGAATCC AGATCCAATA AAATCAAAAA ATTATTTTGC AGCAGCCTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATTTCTG GACCAAATTG TCTTCGAGTA GGTCAGCTAG CTCCTGATTT TTCAGCTACA GCTGTTTATG ACCAAGAATT TAAAACGTTA AAATTATCTG ATCTCAAGAA TAAGTATATT  GTCTTATTCT TTTATCCTTT AGATTTTACA TTTGTGTGCC CTACAGAAAT TACAGCATTT AGCGATAAGT ATAATGCTTT TTCGGAACTT AATACAGAAG TTCTTGGAGT CTCGGTTGAT  AGTGAGTATT CTCATCTTGC TTGGTTACAG ACTGACAGAG AATCAGGTGG ATTAGGAGAT CTTTCATATC CATTAGTATC AGACTTAAAA AAAGAGATCA GTGCAGCTTA TAATGTTTTG  AATAGTGATG GTGTAGCTCT AAGAGGACTA TTTATTATAG ACCCGAAAGG AATTATTCAG TACTCTACAA TCAATAATCT AGAGTTTGGC AGGAGTGTAG AAGAAACTTT GAGGGTTTTA  CAAGCAATTC AATATGTACA ATCTCATCCA GATGAAGTTT GTCCAGCTAA TTGGAAGCCT GGTGACAAAA CAATGAATCC AGATCCAATA AAATCAAAAA ATTATTTTGC AGCAGCCTAG 

Retrieve as FASTA