Entry information : NhyCcP07
Entry ID 11150
Creation 2012-06-12 (Qiang Li)
Last sequence changes 2012-06-12 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-13 (Christophe Dunand)
Peroxidase information: NhyCcP07
Name NhyCcP07
Class Cytochrome C peroxidase     [Orthogroup: CcP001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Nitella
Organism Nitella hyalina    [TaxId: 181804 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NhyCcP07
start..stop
S start..stop
VcaCcP01 338 3e-117 2..243 116..357
CsubCcP01 333 2e-115 1..243 93..338
CvenCcP01 333 3e-115 3..243 117..356
TmelCcP01 332 7e-115 3..243 115..354
Literature and cross-references NhyCcP07
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO566318.1 [Fragment]
Protein sequence: NhyCcP07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   243
PWM (Da):   %s   27125.29  
PI (pH):   %s   6.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KSIAALLDDN NYxDGSYGPL FVRLGWHASG TYSHIDSTGG SNGGCMRFEP ESAWGANKGL HLARERLESV YRAHPGLTYA DLYTLAAVVA IEEMGGPTIK WRPGRNDHKD GKKSPPDGRL  PDAAQGAQHI RDIFYRMGFN DQEIVALIGA HSLGRCHTDR SGYDGPWTNA PTTFSNEYFR LLIEEKWQER RWKGPKQFED VKTKTLMMLP ADMALVEDPE FRKYVVQYTK DGDKFAKDFC 
CSF 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Strain="KGK0190".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAAAGATTTT ATTGTTTTTT TTACTTAACT AAAAGAATAA ATGATGTTTG TGAACATCGT ATATCAAAGG AAAAAGAAAA TTGATCACCC AAAGAAAGAA AATGTAATTA TGTTAGTTTG  AAAGAAGAAA AAAAATAGTC TTAACCGAAA ATTCGTTTGA AGAATGACGT ATTTTTTCCT TGTGTACTTC CATCAGTAGT TTTAAAATCC ACGCCTAATT CTAATAATTT TTCAAAAGCT  GCAGCAAAAA TCTTTTGCAA ATTTATCGCC ATCTTTTGTA TATTGAACAA CATATTTTCG AAATTCAGGA TCTTCAACAA GTGCCATATC CGCTGGTAAC ATCATTAATG TTTTTGTTTT  AACATCTTCG AATTGTTTTG GACCTTTCCA ACGACGTTCT TGCCATTTTT CTTCAATTAA AAGACGAAAA TATTCGTTGG AAAATGTGGT TGGTGCATTT GTCCATGGTC CATCATAACC  ACTTCGATCA GTATGACATC GACCTAATGA ATGTGCACCA ATTAATGCAA CGATTTCTTG ATCATTAAAA CCCATTCGAT AGAATATATC ACGAATATGT TGAGCACCTT GAGCAGCATC  AGGTAAACGA CCATCAGGAG GAGATTTTTT TCCATCTTTA TGATCATTTC GACCTGGACG CCATTTTATT GTTGGACCAC CCATTTCTTC AATAGCAACA ACAGCTGCTA ATGTATATAA  ATCTGCATAA GTTAAACCTG GATGTGCACG ATAAACACTT TCTAAACGTT CACGAGCCAA ATGTAAACCT TTATTAGCTC CCCAAGCACT TTCTGGTTCG AATCGCATAC AACCACCATT  GGATCCACCA GTTGAATCAA TATGTGAATA TGTTCCACTT GCATGCCAAC CTAATCGAAC GAATAATGGA CCRTAACTTC CATCAKCATA ATTATTGTCA TCTAAAAGTG CAGCAATGGA 
TTTCGTACTT CTTTATAATC AACTTTTGAT GGTGTAGCTA ATTTATTATC AGCTGGTGCA GTTGATGCAT GAAGGACAAA GGCAATTCCA CCGGATAAAG CAAGAGTAGC GACACCAG 

Retrieve as FASTA