Entry information : OsPrx108
Entry ID 1118
Creation 2006-07-26 (Filippo Passardi)
Last sequence changes 2006-07-26 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsPrx108
Name OsPrx108
Class Class III peroxidase     [Orthogroup: Prx147]*
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx108
start..stop
S start..stop
SiPrx141 432 9e-153 27..344 44..360
SbPrx44 422 8e-149 39..344 48..349
SiPrx140 411 1e-144 40..344 43..345
SiPrx176 409 8e-144 39..344 46..350
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 26561985..26563019 1035  
join(26561985..26563019)


exon

Literature and cross-references OsPrx108
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q8GVF7
DNA ref. GenBank:   NC_008400.1 (26561985..26563016)
Protein sequence: OsPrx108
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344 (323)
PWM (Da):   %s   34453.43 (32350.2)  
PI (pH):   %s   4.79 (4.59) Peptide Signal:   %s   cut: 22 range:22-344
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATKLLAAVI TVLALLGHVM GQGGYGPSPS PSPSPSSSGG GLAVGYYDSV CPNAEEIVRG VVKNAVAQDA GVGAGLIRLL FHDCFVQGCD GSVLLDATAA NTQPEKLAPP NLTLRGFEVI  DEAKAALEAA CPGDVSCADV VAFAARDATV LLSGSGVDFA MPAGRLDGRV SLASEALGIL PPPTSNLSAL TASFAAKGLG VGDLVVLSGA HSVGRSHCSS FSDRLNSSSS SGSDINPALA 
ASLTQQCSAN ASSGGGGDPT VMQDAVTPDV LDRQYYTNVL NGSALFTSDA ALLTSLETKV AVLANAIIPG LWEGKFRAAM VRMAAVEVKS GAGGEIRKNC RVVS 

Retrieve as FASTA  
Remarks chromosome 7. 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTA AGCTGCTTGC TGCTGTGATC ACTGTGCTAG CTTTGCTGGG CCATGTCATG GGCCAAGGAG GGTACGGCCC AAGCCCAAGC CCAAGCCCGA GCCCGAGTTC GAGCGGCGGC  GGGCTCGCCG TCGGCTACTA CGACAGCGTC TGCCCCAACG CCGAGGAGAT CGTGAGGGGC GTCGTCAAGA ACGCGGTGGC GCAGGACGCC GGCGTCGGAG CGGGGCTCAT CCGCTTGCTC  TTCCACGACT GCTTCGTCCA GGGGTGTGAT GGCTCCGTCC TCCTCGACGC GACGGCGGCG AACACGCAGC CCGAGAAGCT GGCGCCGCCG AACCTGACGC TGCGGGGATT CGAGGTGATC  GACGAGGCCA AGGCGGCGCT GGAGGCGGCG TGCCCGGGCG ACGTCTCCTG CGCCGACGTC GTCGCCTTCG CCGCGCGCGA CGCCACCGTG CTCCTCAGCG GCAGCGGGGT CGACTTCGCC  ATGCCCGCGG GGCGGCTCGA CGGGCGCGTG TCGCTCGCCA GCGAGGCGCT CGGCATCCTC CCGCCGCCGA CCTCCAACCT CAGCGCCCTC ACCGCCAGCT TCGCCGCCAA GGGGCTCGGC  GTCGGCGACC TCGTCGTGCT CTCCGGCGCG CACTCCGTCG GCAGGTCACA CTGCTCCTCC TTCTCCGACC GCCTCAACTC GTCGTCGTCG TCGGGCTCCG ACATCAACCC GGCCCTCGCC  GCCTCCCTGA CGCAGCAGTG CAGCGCGAAC GCGAGCAGCG GCGGCGGCGG CGACCCCACG GTGATGCAGG ACGCCGTGAC GCCCGACGTG CTCGACAGGC AGTACTACAC CAACGTGCTC  AACGGCAGCG CGCTGTTCAC GTCGGACGCG GCGCTGCTGA CGTCGCTGGA GACGAAGGTG GCGGTGCTGG CGAACGCGAT CATCCCGGGG CTGTGGGAGG GGAAGTTCAG GGCGGCGATG 
GTGAGGATGG CCGCCGTCGA GGTCAAGTCC GGCGCCGGCG GCGAGATCAG GAAGAACTGC AGGGTCGTCA GCTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTA AGCTGCTTGC TGCTGTGATC ACTGTGCTAG CTTTGCTGGG CCATGTCATG GGCCAAGGAG GGTACGGCCC AAGCCCAAGC CCAAGCCCGA GCCCGAGTTC GAGCGGCGGC  GGGCTCGCCG TCGGCTACTA CGACAGCGTC TGCCCCAACG CCGAGGAGAT CGTGAGGGGC GTCGTCAAGA ACGCGGTGGC GCAGGACGCC GGCGTCGGAG CGGGGCTCAT CCGCTTGCTC  TTCCACGACT GCTTCGTCCA GGGGTGTGAT GGCTCCGTCC TCCTCGACGC GACGGCGGCG AACACGCAGC CCGAGAAGCT GGCGCCGCCG AACCTGACGC TGCGGGGATT CGAGGTGATC  GACGAGGCCA AGGCGGCGCT GGAGGCGGCG TGCCCGGGCG ACGTCTCCTG CGCCGACGTC GTCGCCTTCG CCGCGCGCGA CGCCACCGTG CTCCTCAGCG GCAGCGGGGT CGACTTCGCC  ATGCCCGCGG GGCGGCTCGA CGGGCGCGTG TCGCTCGCCA GCGAGGCGCT CGGCATCCTC CCGCCGCCGA CCTCCAACCT CAGCGCCCTC ACCGCCAGCT TCGCCGCCAA GGGGCTCGGC  GTCGGCGACC TCGTCGTGCT CTCCGGCGCG CACTCCGTCG GCAGGTCACA CTGCTCCTCC TTCTCCGACC GCCTCAACTC GTCGTCGTCG TCGGGCTCCG ACATCAACCC GGCCCTCGCC  GCCTCCCTGA CGCAGCAGTG CAGCGCGAAC GCGAGCAGCG GCGGCGGCGG CGACCCCACG GTGATGCAGG ACGCCGTGAC GCCCGACGTG CTCGACAGGC AGTACTACAC CAACGTGCTC  AACGGCAGCG CGCTGTTCAC GTCGGACGCG GCGCTGCTGA CGTCGCTGGA GACGAAGGTG GCGGTGCTGG CGAACGCGAT CATCCCGGGG CTGTGGGAGG GGAAGTTCAG GGCGGCGATG 
GTGAGGATGG CCGCCGTCGA GGTCAAGTCC GGCGCCGGCG GCGAGATCAG GAAGAACTGC AGGGTCGTCA GCTAA 

Retrieve as FASTA