Entry information : LcPrx03 (POD3 / pericarp peroxidase 3)
Entry ID 11181
Creation 2012-06-29 (Christophe Dunand)
Last sequence changes 2012-06-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-02-15 (Christophe Dunand)
Peroxidase information: LcPrx03 (POD3 / pericarp peroxidase 3)
Name (synonym) LcPrx03 (POD3 / pericarp peroxidase 3)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Sapindaceae Litchi
Organism Litchi chinensis    [TaxId: 151069 ]
Cellular localisation N/D
Tissue type Pericarps
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LcPrx03
start..stop
S start..stop
CclPrx35 594 0 1..331 1..330
MePrx23 594 0 1..332 1..327
RcPrx17 593 0 1..332 1..331
CsPrx10 592 0 1..331 1..330
Literature and cross-references LcPrx03 (POD3 / pericarp peroxidase 3)
Literature Guo,Z.-X., Pan,T.-F., Wang,J.-B., Lin,L., Zhong,F.-L. and Pan,D.-M. cDNA cloning of peroxidases (PODs) from Litchi pericarp
mRNA ref. GenBank:   FJ195750.1
Protein sequence: LcPrx03 (POD3 / pericarp peroxidase 3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (309)
PWM (Da):   %s   36302.61 (33803.3) Transmb domain:   %s   i5-24o
PI (pH):   %s   9.45 (9.43) Peptide Signal:   %s   cut: 24 range:24-332
Sequence
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Send to Peroxiscan
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MARSVSFLLF VVSLIAFAPL CFSAKHNDGY LFPQFYDHSC PKALQIVKSV VAKAVAKEAR MAASLLRLHF HDCFVKGCDA SLLLDSSGTI ISEKRSNPNR NSARGFEVLD EIKSALEKEC  PHTVSCADIL ALAARDSTVL AGGPSWEVPL GRRDSRGASL SGSNNNIPAP NNTFQTILTK FKLQGLDIVD LVALSGSHTI GNSRCTSFRQ RLYNQSGNGQ PDLTLDQSYA AQLRTRCPRS 
GGDQILFFLD FVSPTKFDNS YFENLLASKG LLNSDQVLVT KSKESMDLVK KYAAHNELFF QQFAKSMVKM GNISPLTGSK GEIRKNCRKI NS 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCGGT CTGTGAGCTT CCTTCTTTTT GTCGTTTCTC TAATTGCCTT TGCGCCTCTT TGCTTCTCTG CCAAGCACAA TGATGGCTAC CTCTTTCCGC AATTTTACGA TCACTCTTGC  CCGAAAGCTC TGCAGATAGT GAAGTCCGTT GTGGCCAAAG CTGTTGCCAA AGAAGCCCGC ATGGCTGCTT CATTGCTTAG GCTCCATTTC CATGATTGTT TTGTCAAGGG CTGTGATGCA  TCACTTTTGT TAGACAGCAG TGGCACCATA ATCAGTGAAA AGAGGTCCAA TCCTAACAGA AACTCTGCCA GAGGATTTGA AGTCCTTGAT GAGATCAAAT CTGCTCTAGA GAAGGAGTGT  CCTCACACAG TATCTTGTGC TGATATTTTG GCTCTAGCTG CTAGAGATTC CACAGTTTTG GCTGGTGGAC CTAGCTGGGA AGTTCCATTA GGAAGAAGAG ACTCCAGAGG TGCTAGCTTG  AGTGGCTCTA ACAACAACAT CCCTGCTCCA AACAACACTT TCCAAACCAT CCTCACAAAG TTCAAGTTGC AAGGCCTTGA TATTGTTGAT CTTGTAGCAC TATCCGGGAG CCACACAATT  GGAAACTCCC GGTGCACCAG CTTCAGGCAG AGGTTGTACA ACCAGTCAGG CAATGGACAA CCAGACCTCA CTCTCGACCA GTCATATGCT GCACAGCTAA GAACCAGGTG TCCACGATCA  GGTGGTGATC AGATCCTCTT CTTCTTGGAC TTTGTCAGCC CAACAAAGTT TGACAACAGC TACTTCGAAA ATTTGTTAGC TTCAAAGGGC CTATTGAACT CTGACCAAGT TCTCGTCACA  AAGAGTAAGG AATCAATGGA CCTAGTGAAG AAATATGCAG CGCACAATGA GCTCTTCTTC CAGCAATTTG CCAAGTCCAT GGTCAAGATG GGCAACATTT CTCCATTGAC AGGTTCTAAG 
GGAGAGATTA GAAAGAATTG CAGGAAAATC AACAGTTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATAGCAACC TTTGAAAGTC TCTCCATTTC ATACTTTAAG CAAGCAATGG CTCGGTCTGT GAGCTTCCTT CTTTTTGTCG TTTCTCTAAT TGCCTTTGCG CCTCTTTGCT TCTCTGCCAA  GCACAATGAT GGCTACCTCT TTCCGCAATT TTACGATCAC TCTTGCCCGA AAGCTCTGCA GATAGTGAAG TCCGTTGTGG CCAAAGCTGT TGCCAAAGAA GCCCGCATGG CTGCTTCATT  GCTTAGGCTC CATTTCCATG ATTGTTTTGT CAAGGGCTGT GATGCATCAC TTTTGTTAGA CAGCAGTGGC ACCATAATCA GTGAAAAGAG GTCCAATCCT AACAGAAACT CTGCCAGAGG  ATTTGAAGTC CTTGATGAGA TCAAATCTGC TCTAGAGAAG GAGTGTCCTC ACACAGTATC TTGTGCTGAT ATTTTGGCTC TAGCTGCTAG AGATTCCACA GTTTTGGCTG GTGGACCTAG  CTGGGAAGTT CCATTAGGAA GAAGAGACTC CAGAGGTGCT AGCTTGAGTG GCTCTAACAA CAACATCCCT GCTCCAAACA ACACTTTCCA AACCATCCTC ACAAAGTTCA AGTTGCAAGG  CCTTGATATT GTTGATCTTG TAGCACTATC CGGGAGCCAC ACAATTGGAA ACTCCCGGTG CACCAGCTTC AGGCAGAGGT TGTACAACCA GTCAGGCAAT GGACAACCAG ACCTCACTCT  CGACCAGTCA TATGCTGCAC AGCTAAGAAC CAGGTGTCCA CGATCAGGTG GTGATCAGAT CCTCTTCTTC TTGGACTTTG TCAGCCCAAC AAAGTTTGAC AACAGCTACT TCGAAAATTT  GTTAGCTTCA AAGGGCCTAT TGAACTCTGA CCAAGTTCTC GTCACAAAGA GTAAGGAATC AATGGACCTA GTGAAGAAAT ATGCAGCGCA CAATGAGCTC TTCTTCCAGC AATTTGCCAA  GTCCATGGTC AAGATGGGCA ACATTTCTCC ATTGACAGGT TCTAAGGGAG AGATTAGAAA GAATTGCAGG AAAATCAACA GTTAAATTGT GTTATAATTG CACCAATAAA AGAATAAGTA  AATGTGTCTC TGCTTTGTTG TTTCATGTTC ATTTTTTCTT TTTCAATTGT CTGGCTTGTT GTAGCTAGAT GTTAGACTTT GTGGTCTGGA CTTGCATATT GAATTATGTG GATTCTGTTG 
TTGCATTTAT TGAAATTTTA CGTCATTCTT GTGTAAGAAC TGGAATTAGA ATAACATGTT CTTGTTGAAT TATTCCCTTT TTTTAATACA TAAAAAAAAA AAAAAA 

Retrieve as FASTA