Entry information : NgrBCP
Entry ID 11184
Creation 2012-07-03 (Christophe Dunand)
Last sequence changes 2012-07-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-03 (Christophe Dunand)
Peroxidase information: NgrBCP
Name NgrBCP
Class Atypical 2-Cysteine peroxiredoxin (type BCP)    [Orthogroup: BCP001]
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrBCP
start..stop
S start..stop
FacBCP02 134 6e-41 29..172 4..143
TacBCP 131 1e-39 27..172 2..144
TvoBCP 129 9e-39 27..172 4..146
PItoBCP02 127 3e-38 27..172 2..143
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 68053..68631 579  
complement(join(68053..68631))


exon

Literature and cross-references NgrBCP
Protein ref. UniProtKB:   D2W2U8
DNA ref. GenBank:   NW_003163243.1 (68631..68053)
Protein sequence: NgrBCP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   192
PWM (Da):   %s   21404.87  
PI (pH):   %s   6.31
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGKRKKADS ETSSTKSKKK KTTSDSDLLE VDSIAPDFEV KDQDGETVKL SEIKKTVVLF FYPKDNTPGC KKENIAFSKY SDKFEKNDIK LLGVSTDSVK SHKSFCEKAA LKHTLISDAD 
RDILEKYNAQ SKRAGSKSAR RITYVIGKDM KIVKVYGSVK PETHAKEVFE DLVGKTESED DSEEEEEDSD EE 

Retrieve as FASTA  
Remarks complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGGAA AGAGAAAGAA AGCCGACTCG GAAACATCAT CAACCAAGAG TAAGAAGAAA AAGACAACAT CAGATTCTGA CTTGTTGGAA GTTGATTCTA TTGCTCCAGA TTTTGAAGTA  AAGGATCAAG ATGGAGAAAC TGTTAAACTC TCAGAGATTA AAAAGACAGT GGTCCTATTC TTCTATCCTA AGGATAATAC ACCAGGTTGC AAGAAGGAAA ATATTGCATT CAGCAAGTAT  TCTGACAAGT TTGAAAAGAA TGATATCAAA TTATTGGGTG TTTCTACAGA TTCTGTCAAG AGTCACAAGA GTTTCTGTGA AAAGGCAGCT TTGAAACATA CCCTAATTTC TGATGCCGAT  AGAGACATTT TGGAAAAGTA TAATGCTCAA TCTAAGAGAG CTGGAAGTAA ATCAGCACGT AGAATAACCT ATGTTATTGG AAAGGACATG AAAATTGTCA AGGTTTATGG AAGTGTCAAA 
CCAGAAACAC ATGCAAAGGA AGTATTTGAA GATTTAGTAG GAAAGACAGA AAGTGAAGAT GATTCTGAAG AAGAAGAAGA AGATTCAGAT GAAGAATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGGAA AGAGAAAGAA AGCCGACTCG GAAACATCAT CAACCAAGAG TAAGAAGAAA AAGACAACAT CAGATTCTGA CTTGTTGGAA GTTGATTCTA TTGCTCCAGA TTTTGAAGTA  AAGGATCAAG ATGGAGAAAC TGTTAAACTC TCAGAGATTA AAAAGACAGT GGTCCTATTC TTCTATCCTA AGGATAATAC ACCAGGTTGC AAGAAGGAAA ATATTGCATT CAGCAAGTAT  TCTGACAAGT TTGAAAAGAA TGATATCAAA TTATTGGGTG TTTCTACAGA TTCTGTCAAG AGTCACAAGA GTTTCTGTGA AAAGGCAGCT TTGAAACATA CCCTAATTTC TGATGCCGAT  AGAGACATTT TGGAAAAGTA TAATGCTCAA TCTAAGAGAG CTGGAAGTAA ATCAGCACGT AGAATAACCT ATGTTATTGG AAAGGACATG AAAATTGTCA AGGTTTATGG AAGTGTCAAA 
CCAGAAACAC ATGCAAAGGA AGTATTTGAA GATTTAGTAG GAAAGACAGA AAGTGAAGAT GATTCTGAAG AAGAAGAAGA AGATTCAGAT GAAGAATAA 

Retrieve as FASTA