Entry information : BrPrx64-1Ab_other (Bra039245)
Entry ID 11252
Creation 2012-07-25 (Christophe Dunand)
Last sequence changes 2012-07-25 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: BrPrx64-1Ab_other (Bra039245)
Name (synonym) BrPrx64-1Ab_other (Bra039245)
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx64-1Ab_other
start..stop
S start..stop
BrPrx64_other 359 3e-127 1..187 1..186
BstrPrx12 347 1e-122 1..187 1..186
TsPrx64-1 347 3e-122 1..187 1..186
CrubPrx43 344 3e-121 1..187 1..186
Literature and cross-references BrPrx64-1Ab_other (Bra039245)
Protein sequence: BrPrx64-1Ab_other (Bra039245)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187 (165)
PWM (Da):   %s   20118.25 (17700.0)  
PI (pH):   %s   7.9 (8.49) Peptide Signal:   %s   cut: 23 range:23-187
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNVNFLNLLL TVILAVSFDT EALSPHYYDH TCPKADQIVT NAVKKAMAND KTVPAALLRM HFHDCFVRGC DASVLLDSKG KNKAEKDGPP NISLHAFYVI DNAKKALEEQ CPGVVSCADI 
VSLAARDAVA ISSGGPTWNV SKGRKDGRIS KATETRQLPA PTFNISQLQQ SFSQRGLSME DLVALSG 

Retrieve as FASTA  
Remarks Partial or pseudogene from genomic. Incorrect prediction from Phytozome: GCDAS is missing (frame shift), exon 3 not predicted. Last exon is not found.