Entry information : OsPrx116
Entry ID 1126
Creation 2006-07-26 (Filippo Passardi)
Last sequence changes 2006-07-26 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsPrx116
Name OsPrx116
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Pannicles
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx116
start..stop
S start..stop
TaPrx67 488 2e-175 27..330 38..341
SbPrx118 455 3e-162 27..330 34..339
AtrPrx01 443 7e-158 1..328 1..318
PtPrx08 436 5e-155 23..330 29..331
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29507906..29508898 993  
complement(join(29507906..29508898))


exon

Literature and cross-references OsPrx116
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q6Z3Y8
DNA ref. GenBank:   NC_008400.1 (29508898..29507909)
Protein sequence: OsPrx116
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (311)
PWM (Da):   %s   36053.83 (34077.8)  
PI (pH):   %s   7.69 (7.18) Peptide Signal:   %s   cut: 20 range:20-330
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRRSLVIVMV ACSCATAIAR GGGGGGLKLN FYSESERCPR AEEVVREEVR RLYEEHGNTA VSWLRALFHD CMVYSCDASL LLHTTTTTGV SEQSSHRSFG MRNFKYITAI KAAVERECPA  TVSCADILAL AARDGVAMLG GPSVAMRTGR RDSRESYYGV VEQYIPNHND SVSTVLSRFA AIGVDTEGAV ALLGAHSVGR VHCFNLVGRL YPQVDGSMEA AYGEYLRGRC PTAAATEDTR 
EVVYARNDRV TPMLIDNMYY RNLLAGRGLL LVDQQLASDA RTAPYVRRMA ADNDYFHQRF AAALLTMSEN APLTGAQGEV RKDCRFVNSS 

Retrieve as FASTA  
Remarks chromosome 7. 5 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGCGCA GCTTGGTGAT TGTGATGGTG GCCTGCAGCT GCGCCACAGC CATAGCCAGA GGAGGAGGAG GAGGAGGTCT GAAGCTCAAC TTCTACTCGG AGTCGGAGAG GTGCCCGAGG  GCGGAGGAGG TGGTGAGGGA GGAGGTGCGG AGGCTGTACG AGGAGCACGG CAACACGGCG GTGTCGTGGT TGAGGGCACT CTTCCACGAC TGCATGGTCT ACTCCTGCGA CGCCTCCCTG  CTGCTCCACA CCACCACCAC CACAGGCGTC TCCGAGCAGT CCTCCCACCG CAGCTTCGGC ATGCGCAACT TCAAGTACAT CACCGCCATC AAGGCCGCCG TCGAGCGTGA GTGCCCTGCC  ACCGTCTCCT GCGCCGACAT CCTCGCCCTG GCCGCCCGCG ACGGCGTGGC CATGCTGGGT GGGCCCTCGG TGGCCATGCG GACGGGGCGG CGCGACAGCA GGGAGAGCTA CTACGGCGTG  GTGGAGCAGT ACATCCCCAA CCACAACGAC AGCGTGTCCA CCGTGCTGTC GAGGTTCGCG GCCATCGGGG TGGACACGGA GGGAGCGGTG GCGCTGCTGG GCGCGCACTC GGTGGGGCGC  GTCCACTGCT TCAACCTGGT GGGGAGGCTG TACCCGCAGG TGGACGGCAG CATGGAGGCG GCGTACGGGG AGTACCTGCG GGGGAGGTGC CCGACGGCTG CGGCGACGGA GGACACGAGA  GAGGTGGTGT ACGCGCGCAA CGACCGCGTC ACGCCCATGC TCATCGACAA CATGTACTAC CGCAACCTGC TCGCCGGGCG GGGGCTCCTC CTGGTGGACC AGCAGCTGGC CTCCGACGCC  CGCACGGCGC CCTACGTCCG CCGGATGGCC GCCGACAACG ACTACTTCCA CCAGCGCTTC GCCGCAGCGC TTCTCACCAT GTCCGAGAAC GCGCCGCTCA CCGGCGCACA GGGGGAGGTC 
AGAAAAGACT GCAGGTTCGT CAACTCTAGC TAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGCGCA GCTTGGTGAT TGTGATGGTG GCCTGCAGCT GCGCCACAGC CATAGCCAGA GGAGGAGGAG GAGGAGGTCT GAAGCTCAAC TTCTACTCGG AGTCGGAGAG GTGCCCGAGG  GCGGAGGAGG TGGTGAGGGA GGAGGTGCGG AGGCTGTACG AGGAGCACGG CAACACGGCG GTGTCGTGGT TGAGGGCACT CTTCCACGAC TGCATGGTCT ACTCCTGCGA CGCCTCCCTG  CTGCTCCACA CCACCACCAC CACAGGCGTC TCCGAGCAGT CCTCCCACCG CAGCTTCGGC ATGCGCAACT TCAAGTACAT CACCGCCATC AAGGCCGCCG TCGAGCGTGA GTGCCCTGCC  ACCGTCTCCT GCGCCGACAT CCTCGCCCTG GCCGCCCGCG ACGGCGTGGC CATGCTGGGT GGGCCCTCGG TGGCCATGCG GACGGGGCGG CGCGACAGCA GGGAGAGCTA CTACGGCGTG  GTGGAGCAGT ACATCCCCAA CCACAACGAC AGCGTGTCCA CCGTGCTGTC GAGGTTCGCG GCCATCGGGG TGGACACGGA GGGAGCGGTG GCGCTGCTGG GCGCGCACTC GGTGGGGCGC  GTCCACTGCT TCAACCTGGT GGGGAGGCTG TACCCGCAGG TGGACGGCAG CATGGAGGCG GCGTACGGGG AGTACCTGCG GGGGAGGTGC CCGACGGCTG CGGCGACGGA GGACACGAGA  GAGGTGGTGT ACGCGCGCAA CGACCGCGTC ACGCCCATGC TCATCGACAA CATGTACTAC CGCAACCTGC TCGCCGGGCG GGGGCTCCTC CTGGTGGACC AGCAGCTGGC CTCCGACGCC  CGCACGGCGC CCTACGTCCG CCGGATGGCC GCCGACAACG ACTACTTCCA CCAGCGCTTC GCCGCAGCGC TTCTCACCAT GTCCGAGAAC GCGCCGCTCA CCGGCGCACA GGGGGAGGTC 
AGAAAAGACT GCAGGTTCGT CAACTCTAGC TAA 

Retrieve as FASTA