Entry information : CroPrx10 (cra_locus_65056_iso_1_len_458_ver_3)
Entry ID 11268
Creation 2012-08-17 (Christophe Dunand)
Last sequence changes 2012-08-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-08-17 (Christophe Dunand)
Peroxidase information: CroPrx10 (cra_locus_65056_iso_1_len_458_ver_3)
Name (synonym) CroPrx10 (cra_locus_65056_iso_1_len_458_ver_3)
Class Class III peroxidase     [Orthogroup: Prx028]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx10
start..stop
S start..stop
LePrx20 281 4e-97 1..152 165..316
NtPrx07-1A 279 4e-96 1..152 176..327
NtPrx07-1B 277 1e-95 1..152 165..316
CroPrx09 253 4e-86 1..152 169..320
Literature and cross-references CroPrx10 (cra_locus_65056_iso_1_len_458_ver_3)
Protein sequence: CroPrx10 (cra_locus_65056_iso_1_len_458_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   152
PWM (Da):   %s   16865.2  
PI (pH):   %s   8.06
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SELIRMFGQR GFTAQEMIAL SGAHTLGGAR CSSFKHRLSN FDSTHDVDPT LDAQFAKSLT KKCSGGDKSE QAFDSTKDTF DNDYYNALQR KTGVLFSDQT LYNNPRTKGI VNAYAFNQAM 
FFLDFQQAMV KMGLLDVKEG FNGEVRANCR II 

Retrieve as FASTA  
Remarks Partial sequence from ESTs. Large 5' end is missing.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCAGAGCTTA TAAGAATGTT TGGCCAACGT GGCTTCACTG CTCAAGAAAT GATCGCTCTA TCTGGTGCAC ACACACTAGG AGGGGCAAGA TGCTCATCAT TCAAACACAG GTTGAGTAAC  TTTGACTCAA CACATGATGT GGATCCAACT TTGGATGCCC AATTTGCCAA GTCACTAACC AAAAAATGCA GTGGTGGAGA CAAGTCTGAG CAGGCCTTTG ATAGTACAAA GGACACTTTT  GACAATGACT ACTATAATGC GTTGCAAAGG AAGACTGGTG TCCTCTTCTC TGATCAAACC CTCTACAATA ACCCTAGAAC TAAAGGCATT GTGAATGCTT ATGCCTTTAA TCAAGCCATG 
TTCTTCCTTG ATTTTCAACA AGCTATGGTT AAAATGGGTT TACTTGATGT CAAAGAAGGC TTCAATGGGG AAGTGCGCGC CAACTGCCGT ATCATCAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCAGAGCTTA TAAGAATGTT TGGCCAACGT GGCTTCACTG CTCAAGAAAT GATCGCTCTA TCTGGTGCAC ACACACTAGG AGGGGCAAGA TGCTCATCAT TCAAACACAG GTTGAGTAAC  TTTGACTCAA CACATGATGT GGATCCAACT TTGGATGCCC AATTTGCCAA GTCACTAACC AAAAAATGCA GTGGTGGAGA CAAGTCTGAG CAGGCCTTTG ATAGTACAAA GGACACTTTT  GACAATGACT ACTATAATGC GTTGCAAAGG AAGACTGGTG TCCTCTTCTC TGATCAAACC CTCTACAATA ACCCTAGAAC TAAAGGCATT GTGAATGCTT ATGCCTTTAA TCAAGCCATG 
TTCTTCCTTG ATTTTCAACA AGCTATGGTT AAAATGGGTT TACTTGATGT CAAAGAAGGC TTCAATGGGG AAGTGCGCGC CAACTGCCGT ATCATC 

Retrieve as FASTA