Entry information : CroPrx23(CRO_T031650 / cra_locus_11327_iso_1_len_618_ver_3)
Entry ID 11281
Creation 2012-08-21 (Christophe Dunand)
Last sequence changes 2012-08-21 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-04-15 (Christophe Dunand)
Peroxidase information: CroPrx23(CRO_T031650 / cra_locus_11327_iso_1_len_618_ver_3)
Name CroPrx23(CRO_T031650 / cra_locus_11327_iso_1_len_618_ver_3)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx23
start..stop
S start..stop
LePrx80 369 8e-129 4..326 5..324
VvPrx[P]60 369 2e-128 8..326 8..326
CroPrx58 369 3e-128 23..326 56..359
CmicPrx01 368 3e-128 1..326 1..324
Literature and cross-references CroPrx23(CRO_T031650 / cra_locus_11327_iso_1_len_618_ver_3)
Protein sequence: CroPrx23(CRO_T031650 / cra_locus_11327_iso_1_len_618_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   35844.56  
PI (pH):   %s   8.93
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKGINFLVII FMIILGVCGI SNGQQGLRKN YYAKSCPIAE TIVKQISEKL VAQNANVAAR LLRLHFHDCF VRGCDGSVLI DSTPINTAEK AALPNRFVSG FEIIDEIKAE LERRCPGTVS  CADIIALASR DTVSYQYRRP LWEVFTGRKD GRISLVAEAA ANLPSPFVGF LALVKNFADQ GLNWEDLVIL SGGHTIGNTH CTLLTNRLYN FTGNGSGTDP DINPGYAKNL MRICPNGGDP 
LKVLEMDPKS STNFDTNYYK LVSRNMGIFQ SDEALLKDPK AAKLVKDLQN PRLFFPRFAA SMKKMGEIIS LKNGEGEIRK NCRVVN 

Retrieve as FASTA  
Remarks Partial sequence from genomic and EST.(5' ane 3' ends are missing). Incorrect prediction ; CRO_T031650 (last exon, scaf border) and cro_scaffold_3067066
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCTAAGGA AGAATTACTA TGCAAAGAGC TGTCCAATTG CTGAAACAAT TGTGAAGCAA ATTTCAGAGA AATTAGTTGC TCAAAATGCC AATGTAGCTG CTAGGCTTCT AAGGCTTCAT  TTCCATGATT GTTTTGTAAG GGGTTGTGAT GGATCCGTTC TTATTGACTC AACTCCATCT AATACAGCTG AAAAAGCTGC TTTGCCAAAT CGATTTGTAT CTGGATTTGA GATTATTGAC  GAAATAAAGG CTGAACTTGA AAGAAGATGT CCAGGCACAG TTTCGTGTGC TGATATTATT GCTTTGGCTG CTAGAGATAC TGTTTCATAC CAATATCGTC Gnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnCTTGTCA GGAGGACATA CTATTGGAAA CACACATTGT ACTTTGCTCA CAAACAGACT GTACAATTTC  ACAGGAAATG GATCGGGTAC AGATCCAGAT ATCAACCCAG ATTATGCTAA GAATTTGATG AGAATTTGCC CTAATGGAGG TGATCCATTA AAGGTTCTTG AAATGGATCC ACGAAGTTCA 
ACCAATTTTG ATACAAATTA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCTAAGGA AGAATTACTA TGCAAAGAGC TGTCCAATTG CTGAAACAAT TGTGAAGCAA ATTTCAGAGA AATTAGTTGC TCAAAATGCC AATGTAGCTG CTAGGCTTCT AAGGCTTCAT  TTCCATGATT GTTTTGTAAG GGGTTGTGAT GGATCCGTTC TTATTGACTC AACTCCATCT AATACAGCTG AAAAAGCTGC TTTGCCAAAT CGATTTGTAT CTGGATTTGA GATTATTGAC  GAAATAAAGG CTGAACTTGA AAGAAGATGT CCAGGCACAG TTTCGTGTGC TGATATTATT GCTTTGGCTG CTAGAGATAC TGTTTCATAC CAATATCGTC Gnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnCTTGTCA GGAGGACATA CTATTGGAAA CACACATTGT ACTTTGCTCA CAAACAGACT GTACAATTTC  ACAGGAAATG GATCGGGTAC AGATCCAGAT ATCAACCCAG ATTATGCTAA GAATTTGATG AGAATTTGCC CTAATGGAGG TGATCCATTA AAGGTTCTTG AAATGGATCC ACGAAGTTCA 
ACCAATTTTG ATACAAATTA 

Retrieve as FASTA