Entry information : CroPrx27 (cra_locus_8549_iso_1_len_1406_ver_3)
Entry ID 11285
Creation 2012-08-22 (Christophe Dunand)
Last sequence changes 2012-08-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-08-22 (Christophe Dunand)
Peroxidase information: CroPrx27 (cra_locus_8549_iso_1_len_1406_ver_3)
Name (synonym) CroPrx27 (cra_locus_8549_iso_1_len_1406_ver_3)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx27
start..stop
S start..stop
VvPrx65 499 4e-180 11..333 3..323
MePrx64 493 2e-177 13..333 7..324
CclPrx43 488 1e-175 12..332 8..324
NtPrx44-1A 487 5e-175 25..333 20..325
Literature and cross-references CroPrx27 (cra_locus_8549_iso_1_len_1406_ver_3)
Protein sequence: CroPrx27 (cra_locus_8549_iso_1_len_1406_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (306)
PWM (Da):   %s   35569.66 (32736.2) Transmb domain:   %s   i12-31o
PI (pH):   %s   4.68 (4.50) Peptide Signal:   %s   cut: 28 range:28-333
Sequence
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Send to Peroxiscan
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MKVMVIRSCS SWLLLLMVAM VVTGGGAQVL VENFYSSSCP NVELIVQQSV ASKMQATQTF TPIPATLRLF FHDCFVEGCD GSVLIASPNG DAEKDAPDNL SLAGDGFDTV IKAKQAVEAQ  CPGIVSCADV LAIAARDVIV MAGGPSFSVE LGRKDGLVSK ASRVAGNLPE PSDDLNKLIA LFTKNNLSTM DLIALSGAHS IGFSHCSRFA NRLYSFSPSS PIDPSLDPNY AQQLIQMCPQ 
NVDPSIAVNI DPTTPTTFDN VYYQNLVGGK GLFTSDQELF TDPRTQSTVT DFANNPLNFN AAFVTAMRNL GRVGVKTNNQ QGEIRRDCTT FNS 

Retrieve as FASTA  
Remarks Complete sequence from EST.
CDS
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ATGAAGGTGA TGGTGATCAG AAGCTGCAGC AGCTGGCTTC TCTTGTTGAT GGTAGCAATG GTAGTGACAG GAGGAGGAGC ACAAGTACTA GTGGAGAACT TTTACAGTTC AAGCTGTCCG  AACGTGGAAT TAATTGTGCA GCAGTCAGTG GCTTCCAAAA TGCAGGCGAC TCAAACATTC ACTCCAATTC CTGCCACGCT ACGTCTCTTT TTCCATGACT GCTTTGTTGA GGGGTGTGAT  GGATCTGTTC TTATCGCTTC ACCAAATGGA GATGCAGAAA AAGACGCTCC AGATAATCTT TCTCTAGCTG GAGATGGCTT CGACACTGTC ATCAAGGCAA AACAAGCCGT GGAGGCGCAA  TGCCCTGGCA TTGTCTCATG TGCCGACGTT TTAGCTATTG CTGCAAGAGA TGTGATAGTC ATGGCAGGTG GTCCTTCCTT CAGTGTAGAA CTGGGACGTA AAGACGGTCT AGTTTCTAAG  GCATCTAGAG TTGCTGGAAA CTTGCCTGAA CCATCTGACG ATCTAAACAA GCTAATTGCC CTTTTTACAA AGAACAATCT TAGCACTATG GATCTAATTG CTCTATCAGG TGCTCATTCT  ATTGGTTTTT CTCACTGCAG TCGTTTTGCC AATCGTCTCT ATTCATTCTC ACCTTCATCT CCAATTGATC CTTCTTTGGA TCCAAATTAT GCTCAGCAAT TGATACAAAT GTGCCCTCAA  AATGTGGATC CTAGTATTGC TGTAAACATA GATCCTACCA CTCCAACCAC TTTTGATAAT GTTTATTACC AGAATCTTGT TGGAGGAAAA GGATTGTTCA CTTCAGATCA AGAGCTTTTC  ACCGATCCAA GAACTCAATC TACGGTTACC GATTTTGCAA ACAACCCTTT GAATTTCAAT GCAGCCTTTG TCACAGCAAT GAGAAATCTT GGCAGAGTTG GAGTCAAAAC AAACAACCAG 
CAGGGGGAAA TAAGGAGGGA CTGCACCACC TTCAATTCGT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAAATCCAGG GTTGACAAAA CCTTATATCA GTGGAAATGA AGGTGATGGT GATCAGAAGC TGCAGCAGCT GGCTTCTCTT GTTGATGGTA GCAATGGTAG TGACAGGAGG AGGAGCACAA  GTACTAGTGG AGAACTTTTA CAGTTCAAGC TGTCCGAACG TGGAATTAAT TGTGCAGCAG TCAGTGGCTT CCAAAATGCA GGCGACTCAA ACATTCACTC CAATTCCTGC CACGCTACGT  CTCTTTTTCC ATGACTGCTT TGTTGAGGGG TGTGATGGAT CTGTTCTTAT CGCTTCACCA AATGGAGATG CAGAAAAAGA CGCTCCAGAT AATCTTTCTC TAGCTGGAGA TGGCTTCGAC  ACTGTCATCA AGGCAAAACA AGCCGTGGAG GCGCAATGCC CTGGCATTGT CTCATGTGCC GACGTTTTAG CTATTGCTGC AAGAGATGTG ATAGTCATGG CAGGTGGTCC TTCCTTCAGT  GTAGAACTGG GACGTAAAGA CGGTCTAGTT TCTAAGGCAT CTAGAGTTGC TGGAAACTTG CCTGAACCAT CTGACGATCT AAACAAGCTA ATTGCCCTTT TTACAAAGAA CAATCTTAGC  ACTATGGATC TAATTGCTCT ATCAGGTGCT CATTCTATTG GTTTTTCTCA CTGCAGTCGT TTTGCCAATC GTCTCTATTC ATTCTCACCT TCATCTCCAA TTGATCCTTC TTTGGATCCA  AATTATGCTC AGCAATTGAT ACAAATGTGC CCTCAAAATG TGGATCCTAG TATTGCTGTA AACATAGATC CTACCACTCC AACCACTTTT GATAATGTTT ATTACCAGAA TCTTGTTGGA  GGAAAAGGAT TGTTCACTTC AGATCAAGAG CTTTTCACCG ATCCAAGAAC TCAATCTACG GTTACCGATT TTGCAAACAA CCCTTTGAAT TTCAATGCAG CCTTTGTCAC AGCAATGAGA  AATCTTGGCA GAGTTGGAGT CAAAACAAAC AACCAGCAGG GGGAAATAAG GAGGGACTGC ACCACCTTCA ATTCGTGAAA CCAGTCCAGC AGCAATATGT TTATTCAATA GAGTGTAATT  GACATAATTG GCACCAAACA ATAATAACAT GCAAACGAGG TGGCAGTCCC ATAATGACAC TTCTATCTCC TAGTTACCTT CACCTGACAT GTCAAGTGAG AAGTTTTGAA TTCAAGTAAT  TTTAGACACG GCTTTATACC GAGAACATGT GGAATAAGGA CTCTACTTCA AAGGCTACTT CATTTCTGTA AATAGTTTCC AAAGCTTCAA GTTCAAAGAC TTTCTTCTTT TTTAGGATGA 
GATTCACTTT GTTCTTTCAT CTTTAAGCCA AGTATTTGAA TCTCTATGTA GTGAATAATA GCTCTCTTCC GCTTGAGTAT TGCCCG 

Retrieve as FASTA