Entry information : CroPrx42(CRO_T008444 / cra_locus_24193_iso_1_len_1193_ver_3)
Entry ID 11307
Creation 2012-09-13 (Christophe Dunand)
Last sequence changes 2012-09-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-07 (Christophe Dunand)
Peroxidase information: CroPrx42(CRO_T008444 / cra_locus_24193_iso_1_len_1193_ver_3)
Name CroPrx42(CRO_T008444 / cra_locus_24193_iso_1_len_1193_ver_3)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx42
start..stop
S start..stop
MguPrx01 481 1e-172 26..339 22..329
PtPrx15 473 2e-169 1..328 1..326
LePrx93 469 8e-168 4..331 1..330
CcampPrx80 466 2e-166 8..339 13..342
Literature and cross-references CroPrx42(CRO_T008444 / cra_locus_24193_iso_1_len_1193_ver_3)
Protein sequence: CroPrx42(CRO_T008444 / cra_locus_24193_iso_1_len_1193_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341 (322)
PWM (Da):   %s   37576.43 (35501.3)  
PI (pH):   %s   4.74 (4.74) Peptide Signal:   %s   cut: 20 range:20-341
Sequence
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Send to Peroxiscan
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MAAMAFWILV LLFPSLALSA EESHEELSND YYNKTCPQFK TIVQQIITDK QLEFPTTAAG TLRVFFHDCM VGGCDASLLI TSNSFNQAER DADINLSLPG DAFDVVIRAK TALELQCPGV  VSCADILAEA TRDLVSMVGG PFYNVPLGRK DSLVSNSIDV EGHIARPNMS MSQIIDMFTA KGFDVKEMVA LMGAHTIGFS HCTEFSNRIF NFDNKSEIDP SLNPEYAQGL RKLCADYQKN 
QQIAAFNDVM TPGKFDNMYF LNLQKGLGLL ASDQLLATDP RTKSFVDLYA ANQTAFFDDF SRVMEKVNVY QVKTGKDGEV RRRCDSFNNP NHPNVGNGSA V 

Retrieve as FASTA  
Remarks Complete sequence from EST and genomic (intron less, incorrect prediction, CRO_T008444 contains only GGP to stop)
DNA
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ATGGCAGCAA TGGCTTTTTG GATCCTTGTT CTTCTCTTTC CATCCCTGGC TTTATCTGCA GAAGAATCTC ATGAAGAATT ATCAAATGAT TATTACAATA AAACATGTCC ACAATTCAAA  ACAATTGTTC AACAAATAAT CACCGATAAA CAATTAGAAT TTCCGACGAC TGCCGCCGGT ACTCTTCGCG TCTTCTTCCA CGATTGTATG GTCGGAGGAT GCGACGCATC TCTTCTTATT  ACTTCCAATA GCTTCAATCA AGCCGAACGC GACGCCGATA TTAACCTCTC CCTTCCCGGC GATGCTTTCG ATGTTGTTAT ACGCGCTAAA ACCGCGCTTG AGCTTCAATG CCCCGGCGTC  GTTTCGTGTG CCGATATACT CGCCGAAGCT ACCAGAGATC TTGTTTCTAT GGTCGGAGGT CCGTTCTATA ATGTTCCGCT AGGGCGAAAA GATAGCCTCG TTTCGAATTC GATCGATGTT  GAAGGACACA TTGCGAGGCC AAATATGTCG ATGAGTCAAA TCATCGATAT GTTCACAGCA AAAGGATTTG ATGTAAAGGA AATGGTGGCT TTAATGGGTG CTCATACGAT CGGATTCTCG  CATTGTACGG AATTCAGCAA CAGAATTTTC AATTTCGACA ACAAATCAGA GATCGATCCA AGTTTAAATC CAGAATATGC ACAAGGATTG AGGAAATTAT GTGCAGATTA CCAGAAGAAT  CAACAGATCG CGGCGTTTAA TGATGTGATG ACGCCGGGAA AATTCGATAA TATGTACTTT TTGAATCTGC AGAAAGGATT AGGGCTTTTG GCTTCCGATC AACTTCTGGC GACTGATCCG  AGAACGAAAT CGTTTGTAGA TCTTTATGCG GCGAATCAAA CGGCGTTTTT TGATGATTTT TCTCGTGTTA TGGAAAAAGT GAATGTTTAT CAAGTAAAGA CTGGAAAAGA CGGTGAAGTG 
AGGCGGAGAT GTGATTCTTT CAATAACCCT AATCATCCAA ATGTTGGGAA TGGTTCAGCT GTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCAA TGGCTTTTTG GATCCTTGTT CTTCTCTTTC CATCCCTGGC TTTATCTGCA GAAGAATCTC ATGAAGAATT ATCAAATGAT TATTACAATA AAACATGTCC ACAATTCAAA  ACAATTGTTC AACAAATAAT CACCGATAAA CAATTAGAAT TTCCGACGAC TGCCGCCGGT ACTCTTCGCG TCTTCTTCCA CGATTGTATG GTCGGAGGAT GCGACGCATC TCTTCTTATT  ACTTCCAATA GCTTCAATCA AGCCGAACGC GACGCCGATA TTAACCTCTC CCTTCCCGGC GATGCTTTCG ATGTTGTTAT ACGCGCTAAA ACCGCGCTTG AGCTTCAATG CCCCGGCGTC  GTTTCGTGTG CCGATATACT CGCCGAAGCT ACCAGAGATC TTGTTTCTAT GGTCGGAGGT CCGTTCTATA ATGTTCCGCT AGGGCGAAAA GATAGCCTCG TTTCGAATTC GATCGATGTT  GAAGGACACA TTGCGAGGCC AAATATGTCG ATGAGTCAAA TCATCGATAT GTTCACAGCA AAAGGATTTG ATGTAAAGGA AATGGTGGCT TTAATGGGTG CTCATACGAT CGGATTCTCG  CATTGTACGG AATTCAGCAA CAGAATTTTC AATTTCGACA ACAAATCAGA GATCGATCCA AGTTTAAATC CAGAATATGC ACAAGGATTG AGGAAATTAT GTGCAGATTA CCAGAAGAAT  CAACAGATCG CGGCGTTTAA TGATGTGATG ACGCCGGGAA AATTCGATAA TATGTACTTT TTGAATCTGC AGAAAGGATT AGGGCTTTTG GCTTCCGATC AACTTCTGGC GACTGATCCG  AGAACGAAAT CGTTTGTAGA TCTTTATGCG GCGAATCAAA CGGCGTTTTT TGATGATTTT TCTCGTGTTA TGGAAAAAGT GAATGTTTAT CAAGTAAAGA CTGGAAAAGA CGGTGAAGTG 
AGGCGGAGAT GTGATTCTTT CAATAACCCT AATCATCCAA ATGTTGGGAA TGGTTCAGCT GTGTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGCCGGGGG CCCCAAAATC TCTTCTTCAT TGCTACCATT TTTCTCAATC GCAAAAAACC ATGGCAGCAA TGGCTTTTTG GATCCTTGTT CTTCTCTTTC CATCCCTGGC TTTATCTGCA  GAAGAATCTC ATGAAGAATT ATCAAATGAT TATTACAATA AAACATGTCC ACAATTCAAA ACAATTGTTC AACAAATAAT CACCGATAAA CAATTAGAAT TTCCGACGAC TGCCGCCGGT  ACTCTTCGCG TCTTCTTCCA CGATTGTATG GTCGGAGGAT GCGACGCATC TCTTCTTATT ACTTCCAATA GCTTCAATCA AGCCGAACGC GACGCCGATA TTAACCTCTC CCTTCCCGGC  GATGCTTTCG ATGTTGTTAT ACGCGCTAAA ACCGCGCTTG AGCTTCAATG CCCCGGCGTC GTTTCGTGTG CCGATATACT CGCCGAAGCT ACCAGAGATC TTGTTTCTAT GGTCGGAGGT  CCGTTCTATA ATGTTCCGCT AGGGCGAAAA GATAGCCTCG TTTCGAATTC GATCGATGTT GAAGGACACA TTGCGAGGCC AAATATGTCG ATGAGTCAAA TCATCGATAT GTTCACAGCA  AAAGGATTTG ATGTAAAGGA AATGGTGGCT TTAATGGGTG CTCATACGAT CGGATTCTCG CATTGTACGG AATTCAGCAA CAGAATTTTC AATTTCGACA ACAAATCAGA GATCGATCCA  AGTTTAAATC CAGAATATGC ACAAGGATTG AGGAAATTAT GTGCAGATTA CCAGAAGAAT CAACAGATCG CGGCGTTTAA TGATGTGATG ACGCCGGGAA AATTCGATAA TATGTACTTT  TTGAATCTGC AGAAAGGATT AGGGCTTTTG GCTTCCGATC AACTTCTGGC GACTGATCCG AGAACGAAAT CGTTTGTAGA TCTTTATGCG GCGAATCAAA CGGCGTTTTT TGATGATTTT  TCTCGTGTTA TGGAAAAAGT GAATGTTTAT CAAGTAAAGA CTGGAAAAGA CGGTGAAGTG AGGCGGAGAT GTGATTCTTT CAATAACCCT AATCATCCAA ATGTTGGGAA TGGTTCAGCT 
GTGTAGGCAA TTTGGAACGT GTAACATTTT TGTAACACCT TCTATAATAT TTTTAATTTA ATATATTTTG TTAATAAAAT TTGTTATATA AAAGGTAAAC GGTAGAAATA GTA 

Retrieve as FASTA