Entry information : CroPrx46(CRO_T023464 / cra_locus_46256_iso_1_len_307_ver_3)
Entry ID 11311
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-08 (Christophe Dunand)
Peroxidase information: CroPrx46(CRO_T023464 / cra_locus_46256_iso_1_len_307_ver_3)
Name CroPrx46(CRO_T023464 / cra_locus_46256_iso_1_len_307_ver_3)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx46
start..stop
S start..stop
LePrx106 492 2e-174 1..400 1..415
VvPrx95 441 3e-155 5..400 11..368
CsPrx02 429 2e-150 5..400 3..379
CclPrx09 426 5e-148 5..400 3..464
Literature and cross-references CroPrx46(CRO_T023464 / cra_locus_46256_iso_1_len_307_ver_3)
Protein sequence: CroPrx46(CRO_T023464 / cra_locus_46256_iso_1_len_307_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   400
PWM (Da):   %s   44010.9  
PI (pH):   %s   4.78
Sequence
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Send to Peroxiscan
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MDFSRKLSFL VFLLCVLISL KNQNAEINRS SQAGNWVSSD SYSVSHSESP ISSPPMSRTI EMEIEPPGPP LSLRYDYYRE TCSGAEQTIK SVVQNLYLLK PDIAPSLLRL VFHDCFVQGC  DASVLLDPGD GTESEKDSPP NKSLKGFEVI DDIKSELERI CPGVVSCADI LVLAARESVI LAGGPFYPLQ TGRKDSNMSF PEEATYQLPR PQDDLSNIIE KFGSRGFNEE EIVSLLGAHS  IGKIHCKFFL NRLYNFGGTD QPDPSIDSEF LNFLRSKCGN NNTSFNQSAS PSLSPAPSFS LAPSSAAPAL VEEPSIEMDY EGPGSGFGTT YYQSLLQSRG ILYADQQLTA GEETKNWVRT 
YASDLSLFHK NFALAMIKLS NHRVLTVPSG QVRLDCRRVA * 

Retrieve as FASTA  
Remarks Complete sequence from genomic and two contigs cra_locus_46256_iso_1_len_307_ver_3 (Short PS and 3' end are missing) and cra_locus_43638_iso_1_len_342_ver_ 3 (fragment).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATTTTT CTCGAAAACT GAGTTTCTTG GTATTTCTAT TGTGTGTTCT GATTTCTCTG AAGAACCAAA ATGCCGAAAT CAATAGAAGT TCTCAAGCTG GGAATTGGGT TTCATCTGAC  TCATATTCAG TTTCCCATTC CGAATCACCA ATTTCATCTC CACCAATGTC CAGAACAATT GAGATGGAGA TAGAGCCACC TGGGCCTCCT TTATCTCTTA GATATGATTA CTATAGAGAA  ACTTGCAGTG GAGCTGAACA AACTATCAAA TCCGTCGTTC AAAACCTCTA TTTGCTCAAG CCTGATATTG CTCCTTCGCT TTTGAGACTA GTTTTCCATG ATTGCTTTGT GCAGGTCACT  TTTCTTGATT TTTTCTTGTT TGGTTTGATA TGGGCTTTCA TCATTTTGTT CATTCTCTTG CTTATGTGAT TTGGGCTGCT TGTGATTCTT GTTTCTTATT ATGATTTCTT TGTGCAGGTG  ATTTTCTTGA TTTGTTCTTG TTTGGTTTGA TATGCGCTTT CATCATTTTG TTCATTCTCA TGCTTATGTG TTTTGGGCTT CTTGTGATTT TACTTCTTGT TTCTTATTAT GATTGCTTAG  TGCAGATGAT TTTCTTGATT TGTTCTTGTT TGGTTTGATG TGGGTTTTCA TCATTTTGTT TATTCCCATG CTTATTTGTA TATTAGCCTG CTTGTGATTT TACTTCTTGT TTCTTATTGA  GCCGTTGGAA TCAGAGCTTA TTTAGTTTTC TGCAATAATC TTTGTTCTTT CTTGTAATGG GCATTTCTTT TTTTTTTTCC AAGATAATTT CTTAGCTAGA ACCTTTTATG GTCGTTTTAT  TATGTCTGCA TTCAACTTCA ATTGTTTAAA GGGTATTTAT TCTCTTTGAA ATTGAAGCCA CTGATTTGTT GTTTCTGCTG ATTTTCATCA TTATAGTTTT CTATGAACTA CTGTTTGGAT  AGGGATGTGA TGCCTCTGTT TTACTGGATC CTGGTGATGG AACTGAAAGT GAGAAAGATT CACCCCCAAA CAAATCCCTC AAAGGTTTTG AGGTTATTGA CGATATTAAG TCAGAGCTTG  AGAGGATCTG TCCAGGAGTA GTTTCATGTG CTGACATTCT TGTTTTAGCA GCAAGAGAAA GTGTTATTCT GGTCTGTTTC ATTCTCTCTC AAACAAATTA ACAGTATTGA GTGATCAACG  CTTATTATGT AATATTTTTA TTTCAGGCTG GAGGGCCATT CTACCCACTA CAAACCGGTA GAAAAGACAG TAATATGTCT TTCCCAGAAG AAGCAACATA TCAGCTTCCC AGACCTCAAG  ATGATCTTTC CAATATTATT GAGAAATTTG GATCAAGGGG ATTCAATGAG GAGGAGATAG TTAGCCTCTT AGGTGATGTT CCGATCTTTT GTCTCTTCCT TTCTTGCACT GCTCTAAATC  AAATTTTTTT TGGTGCCTAT TTTCTTGAGC TATGTCTGTG TTGTTGCAAT GTCGAAATTA CTCAAGGAAT AATGGTTTGC CCATAAGTAT ACGGGTGGAC TCAGTCCTAC TAAATTCTTG  AATACTAGCA GATGATTGGT TTGTGTTTTC TTGAATCATT TCCATGCCAT TTCACACCCA AAACAAAGTT CTGATTTATT GGCTAGTATA AATTTATTTA TATGGTTTTA CCTGCTTTGA  ATCTCATCTT CCCTAGCTGT TTGCCTGGAT TCTTATTTCT AGTAACCAGC TAGTGAAAAC GTTGTTTTGC TTTTACTTGA CCTAGCTTGT GAAATGAGAA CTTTGTTCTT GAAATGGTCT  AACCTTGGAA ATTATTTTCC TTTTTCTTCT CCTATGCAGG CGCCCATAGT ATTGGAAAAA TTCATTGCAA GTTTTTCCTC AACAGGCTTT ACAATTTTGG TGGGACTGAT CAGCCTGATC  CATCTATTGA TTCTGAATTT CTTAACTTTC TGAGATCAAA ATGTGGGAAC AACAACACCT CATTTAATCA ATCAGCATCA CCATCTCTTT CACCGGCACC ATCTTTCTCG TTAGCACCAT  CTTCAGCCGC ACCGGCATTA GTTGAGGAAC CAAGCATTGA AATGGACTAT GAAGGGCCTG GATCAGGTTT TGGTACAACA TACTACCAGA GTCTTCTACA AAGTAGGGGA ATACTTTACG  CCGATCAACA GCTGACTGCA GGGGAAGAAA CCAAGAACTG GGTTAGAACT TACGCCTCTG ACCTCTCTTT GTTTCACAAG AACTTTGCTC TTGCAATGAT CAAGCTCTCA AATCACCGAG 
TTTTGACAGT CCCATCAGGT CAGGTTAGGC TAGATTGTCG AAGAGTTGCC TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATTTTT CTCGAAAACT GAGTTTCTTG GTATTTCTAT TGTGTGTTCT GATTTCTCTG AAGAACCAAA ATGCCGAAAT CAATAGAAGT TCTCAAGCTG GGAATTGGGT TTCATCTGAC  TCATATTCAG TTTCCCATTC CGAATCACCA ATTTCATCTC CACCAATGTC CAGAACAATT GAGATGGAGA TAGAGCCACC TGGGCCTCCT TTATCTCTTA GATATGATTA CTATAGAGAA  ACTTGCAGTG GAGCTGAACA AACTATCAAA TCCGTCGTTC AAAACCTCTA TTTGCTCAAG CCTGATATTG CTCCTTCGCT TTTGAGACTA GTTTTCCATG ATTGCTTTGT GCAGGGATGT  GATGCCTCTG TTTTACTGGA TCCTGGTGAT GGAACTGAAA GTGAGAAAGA TTCACCCCCA AACAAATCCC TCAAAGGTTT TGAGGTTATT GACGATATTA AGTCAGAGCT TGAGAGGATC  TGTCCAGGAG TAGTTTCATG TGCTGACATT CTTGTTTTAG CAGCAAGAGA AAGTGTTATT CTGGCTGGAG GGCCATTCTA CCCACTACAA ACCGGTAGAA AAGACAGTAA TATGTCTTTC  CCAGAAGAAG CAACATATCA GCTTCCCAGA CCTCAAGATG ATCTTTCCAA TATTATTGAG AAATTTGGAT CAAGGGGATT CAATGAGGAG GAGATAGTTA GCCTCTTAGG CGCCCATAGT  ATTGGAAAAA TTCATTGCAA GTTTTTCCTC AACAGGCTTT ACAATTTTGG TGGGACTGAT CAGCCTGATC CATCTATTGA TTCTGAATTT CTTAACTTTC TGAGATCAAA ATGTGGGAAC  AACAACACCT CATTTAATCA ATCAGCATCA CCATCTCTTT CACCGGCACC ATCTTTCTCG TTAGCACCAT CTTCAGCCGC ACCGGCATTA GTTGAGGAAC CAAGCATTGA AATGGACTAT  GAAGGGCCTG GATCAGGTTT TGGTACAACA TACTACCAGA GTCTTCTACA AAGTAGGGGA ATACTTTACG CCGATCAACA GCTGACTGCA GGGGAAGAAA CCAAGAACTG GGTTAGAACT  TACGCCTCTG ACCTCTCTTT GTTTCACAAG AACTTTGCTC TTGCAATGAT CAAGCTCTCA AATCACCGAG TTTTGACAGT CCCATCAGGT CAGGTTAGGC TAGATTGTCG AAGAGTTGCC 
TGA 

Retrieve as FASTA