Entry information : CroPrx57 (cra_locus_18917_iso_2_len_792_ver_3)
Entry ID 11323
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-17 (Christophe Dunand)
Peroxidase information: CroPrx57 (cra_locus_18917_iso_2_len_792_ver_3)
Name (synonym) CroPrx57 (cra_locus_18917_iso_2_len_792_ver_3)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx57
start..stop
S start..stop
PpePrx26 437 7e-157 1..252 70..321
RcPrx09 430 4e-154 1..252 70..321
VvPrx47 427 5e-153 1..252 73..324
MguPrx92 424 1e-151 1..252 68..319
Literature and cross-references CroPrx57 (cra_locus_18917_iso_2_len_792_ver_3)
Protein sequence: CroPrx57 (cra_locus_18917_iso_2_len_792_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   252
PWM (Da):   %s   27070.77  
PI (pH):   %s   7.1
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DGSVLITGGS AERNALTNGG LRGFEVIDDA KTQLEASCPG VVSCADILAL AARDAVDLSG GPSWGVATGR RDGRISLSSE AANLPSPLDP LSVQRQKFAS KGLDDQDLVT LVGAHTIGRT  DCLFFRYRLY NFTATGNADP SINQAFLTQL QSLCPKNGDP SKRVALDKDS EFSFDVSFFK NVRDGNAVLE SDQRLWGDAS TRKIVENYAG NIRGLLGFRF NFEFPKAMIK MSNIEVKVGT 
QGEIRKVCSK VN 

Retrieve as FASTA  
Remarks Partial sequence from EST. 5'end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGGTTCGG TTCTAATAAC GGGAGGTTCA GCGGAGAGAA ATGCATTGAC AAATGGTGGA TTAAGAGGAT TTGAAGTGAT TGATGATGCT AAAACACAAT TAGAAGCTTC TTGCCCTGGT  GTTGTTTCTT GTGCTGACAT ACTTGCATTA GCTGCTCGTG ATGCTGTTGA CCTGAGTGGG GGTCCGAGTT GGGGAGTGGC TACTGGAAGA AGAGATGGGA GAATCTCTTT ATCCTCAGAA  GCAGCGAACT TGCCTTCACC TTTGGATCCT CTTTCTGTAC AGAGGCAGAA GTTTGCATCC AAAGGCCTTG ATGACCAGGA TCTCGTTACC CTAGTTGGAG CTCACACCAT CGGGCGGACA  GACTGTTTAT TCTTTAGATA CAGACTATAC AATTTCACAG CAACAGGAAA TGCAGATCCC AGCATAAATC AAGCATTCTT AACACAACTT CAGTCTCTGT GTCCCAAAAA TGGCGACCCT  TCGAAACGGG TTGCTTTAGA CAAAGACAGT GAGTTTTCGT TCGATGTGAG CTTCTTCAAG AATGTGAGGG ATGGAAATGC AGTTCTTGAA TCTGATCAGA GGCTTTGGGG AGACGCTTCC  ACACGTAAAA TTGTTGAGAA TTATGCTGGA AATATTAGAG GTTTATTGGG TTTTAGATTT AATTTTGAGT TTCCAAAAGC TATGATTAAA ATGAGTAACA TTGAAGTCAA AGTTGGAACT 
CAAGGAGAGA TTAGAAAGGT TTGCTCTAAG GTAAATTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGGTTCGG TTCTAATAAC GGGAGGTTCA GCGGAGAGAA ATGCATTGAC AAATGGTGGA TTAAGAGGAT TTGAAGTGAT TGATGATGCT AAAACACAAT TAGAAGCTTC TTGCCCTGGT  GTTGTTTCTT GTGCTGACAT ACTTGCATTA GCTGCTCGTG ATGCTGTTGA CCTGAGTGGG GGTCCGAGTT GGGGAGTGGC TACTGGAAGA AGAGATGGGA GAATCTCTTT ATCCTCAGAA  GCAGCGAACT TGCCTTCACC TTTGGATCCT CTTTCTGTAC AGAGGCAGAA GTTTGCATCC AAAGGCCTTG ATGACCAGGA TCTCGTTACC CTAGTTGGAG CTCACACCAT CGGGCGGACA  GACTGTTTAT TCTTTAGATA CAGACTATAC AATTTCACAG CAACAGGAAA TGCAGATCCC AGCATAAATC AAGCATTCTT AACACAACTT CAGTCTCTGT GTCCCAAAAA TGGCGACCCT  TCGAAACGGG TTGCTTTAGA CAAAGACAGT GAGTTTTCGT TCGATGTGAG CTTCTTCAAG AATGTGAGGG ATGGAAATGC AGTTCTTGAA TCTGATCAGA GGCTTTGGGG AGACGCTTCC  ACACGTAAAA TTGTTGAGAA TTATGCTGGA AATATTAGAG GTTTATTGGG TTTTAGATTT AATTTTGAGT TTCCAAAAGC TATGATTAAA ATGAGTAACA TTGAAGTCAA AGTTGGAACT 
CAAGGAGAGA TTAGAAAGGT TTGCTCTAAG GTAAATTAAT CAAACGCTTA AATGAAAATG TAAAAAGACA G 

Retrieve as FASTA