Entry information : VculGPx01
Entry ID 11335
Creation 2012-09-24 (Gisèle Passaia )
Last sequence changes 2012-09-24 (Gisèle Passaia )
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-10-03 (Christophe Dunand)
Peroxidase information: VculGPx01
Name VculGPx01
Class Other glutathione peroxidase    [Orthogroup: Gpx4001]
Taxonomy Eukaryota Fungi Microsporidia Pleistophoridae Vavraia
Organism Vavraia culicis    [TaxId: 103449 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VculGPx01
start..stop
S start..stop
EcuGPx01 140 2e-43 6..163 7..164
ThasGPx03 137 8e-42 1..164 32..196
PulGPx02 139 9e-42 10..164 99..253
DrGPx04-B 135 3e-41 6..159 32..182
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 44962..45462 501  
complement(join(44962..45462))


exon

Literature and cross-references VculGPx01
DNA ref. GenBank:   AEUG01000031.1 (44962..45462)
Protein sequence: VculGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   166
PWM (Da):   %s   19142.88  
PI (pH):   %s   7.5
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARKVSDEFY ALSAKDMNGN DYKFEKLRDN VVLIINSATK CGFATTTFEN LVALAERYHD KNLKILLFPC SQFRNQELED SEKVRKNIER YSKEFIVFEK VDVKGENAHP VFKFLIKHLK 
GTITDNVKWN FTKFLIDQNG IPTKRYGPME PVNVDDPLIE DLLADN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST available.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGGA AAGTATCAGA TGAATTTTAT GCGCTGTCCG CAAAGGATAT GAATGGAAAT GATTACAAAT TTGAAAAATT GAGAGATAAC GTTGTACTGA TAATAAACTC GGCGACAAAA  TGTGGTTTTG CTACGACCAC CTTTGAGAAC TTGGTTGCAT TGGCGGAAAG GTACCATGAC AAGAACCTGA AAATTCTTTT ATTTCCGTGC TCACAGTTTC GTAATCAAGA ACTGGAGGAT  TCCGAGAAAG TGCGAAAAAA CATTGAGAGA TACTCGAAGG AGTTTATAGT GTTTGAAAAA GTGGATGTTA AAGGTGAAAA TGCTCATCCG GTGTTTAAGT TTCTTATCAA GCATCTCAAG  GGCACGATAA CGGATAATGT AAAATGGAAC TTTACCAAGT TTCTGATCGA TCAAAATGGT ATACCCACGA AACGATACGG GCCTATGGAG CCGGTAAATG TTGATGATCC TCTTATAGAA 
GACTTATTAG CAGATAATTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGGA AAGTATCAGA TGAATTTTAT GCGCTGTCCG CAAAGGATAT GAATGGAAAT GATTACAAAT TTGAAAAATT GAGAGATAAC GTTGTACTGA TAATAAACTC GGCGACAAAA  TGTGGTTTTG CTACGACCAC CTTTGAGAAC TTGGTTGCAT TGGCGGAAAG GTACCATGAC AAGAACCTGA AAATTCTTTT ATTTCCGTGC TCACAGTTTC GTAATCAAGA ACTGGAGGAT  TCCGAGAAAG TGCGAAAAAA CATTGAGAGA TACTCGAAGG AGTTTATAGT GTTTGAAAAA GTGGATGTTA AAGGTGAAAA TGCTCATCCG GTGTTTAAGT TTCTTATCAA GCATCTCAAG  GGCACGATAA CGGATAATGT AAAATGGAAC TTTACCAAGT TTCTGATCGA TCAAAATGGT ATACCCACGA AACGATACGG GCCTATGGAG CCGGTAAATG TTGATGATCC TCTTATAGAA 
GACTTATTAG CAGATAATTA A 

Retrieve as FASTA