Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
230 |
PWM (Da): |
25492.67 |
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PI (pH):
| 6.51 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PKSHVQENWR ILDVLAYHPE SLGMFTLLFD DTGIPQDYRN MKGSGVNTYA LINKARKAHY VKFHWKRTCG VKSLLEEEAI RVGGSNHSLA TRDLFDSIAA GNYLEWKLFV QIMDTDYKxK
FDFDPLDVAK TWPEDILPPx MxVGRLVLxK NIDNFFAENE QLAFCPSxVV PGVYYSxDKL xQIRIFSYSD AQRDRLAPNY LQLPSNAPKC AHHNSHHEGF MNCHA*DEEV R
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (5' end is missing, Stops in frame). scaffold_6_22057 (105..795) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCAAATCCC ACGTCCAGGA GAACTGGAGG ATCCTTGACG TTCTCGCCTA CCATCCCGAG AGCTTGGGCA TGTTCACCCT CCTCTTTGAT GATACTGGTA TTCCACAAGA TTACAGGAAC
ATGAAGGGCT CTGGAGTTAA CACCTACGCT TTGATCAACA AGGCCAGAAA AGCGCATTAT GTGAAGTTTC ACTGGAAACG AACTTGCGGG GTCAAGAGCT TACTGGAGGA AGAGGCGATT
AGAGTCGGGG GATCCAATCA CAGCCTTGCG ACTCGGGATC TTTTTGATTC CATTGCTGCT GGAAACTATC TTGAATGGAA ACTTTTCGTT CAGATCATGG ATACTGATTA TAAAnACAAA
TTTGACTTTG ACCCGCTTGA TGTGGCTAAG ACCTGGCCCG AAGACATATT GCCCCCTAnn ATGCnAGTTG GnCGCTTGGT CTTGAnTAAG AACATTGATA ACTTCTTTGC TGAGAATGAA
CAGCTTGCAT TTTGCCCTTC AAnTGTGGTT CCTGGCGTCT ACTACTCAGA nGATAAGCTG CnCCAAATTC GTATTTTCTC ATATTCTGAT GCTCAGAGGG ACCGCCTTGC ACCAAATTAT
CTTCAACTCC CTTCTAATGC TCCTAAATGC GCTCATCACA ACAGTCACCA TGAAGGTTTC ATGAATTGCC ATGCATAGGA TGAAGAGGTA AGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCAAATCCC ACGTCCAGGA GAACTGGAGG ATCCTTGACG TTCTCGCCTA CCATCCCGAG AGCTTGGGCA TGTTCACCCT CCTCTTTGAT GATACTGGTA TTCCACAAGA TTACAGGAAC
ATGAAGGGCT CTGGAGTTAA CACCTACGCT TTGATCAACA AGGCCAGAAA AGCGCATTAT GTGAAGTTTC ACTGGAAACG AACTTGCGGG GTCAAGAGCT TACTGGAGGA AGAGGCGATT
AGAGTCGGGG GATCCAATCA CAGCCTTGCG ACTCGGGATC TTTTTGATTC CATTGCTGCT GGAAACTATC TTGAATGGAA ACTTTTCGTT CAGATCATGG ATACTGATTA TAAAnACAAA
TTTGACTTTG ACCCGCTTGA TGTGGCTAAG ACCTGGCCCG AAGACATATT GCCCCCTAnn ATGCnAGTTG GnCGCTTGGT CTTGAnTAAG AACATTGATA ACTTCTTTGC TGAGAATGAA
CAGCTTGCAT TTTGCCCTTC AAnTGTGGTT CCTGGCGTCT ACTACTCAGA nGATAAGCTG CnCCAAATTC GTATTTTCTC ATATTCTGAT GCTCAGAGGG ACCGCCTTGC ACCAAATTAT
CTTCAACTCC CTTCTAATGC TCCTAAATGC GCTCATCACA ACAGTCACCA TGAAGGTTTC ATGAATTGCC ATGCATAGGA TGAAGAGGTA AGA
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Retrieve as FASTA
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