Entry information : EguPrx[P]111
Entry ID 11423
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-13 (Christophe Dunand)
Peroxidase information: EguPrx[P]111
Name EguPrx[P]111
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]111
start..stop
S start..stop
EgrPrx[P]111 335 2e-120 1..165 1..165
EcamPrx[P]111 333 8e-120 1..165 1..165
EglPrx[P]111 332 3e-119 1..165 1..165
EguPrx[P]107 242 2e-83 19..163 21..168
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5838..6332 495  
join(5838..6332)


exon

Literature and cross-references EguPrx[P]111
Protein sequence: EguPrx[P]111
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165
PWM (Da):   %s   18200.31 Transmb domain:   %s   o35-57i
PI (pH):   %s   9.77
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFAGGCRGQP SPGRGRGSLA CRTSPKKTRV GRLEAIANSL NKWIVIFVLF ISFLVSLRNH KGSSANQHGR RFTLHFSLDS LSPVFLQRND DGVIDREDPA LGLQYDFYRH TCPAAEEIAR 
SSMSRVYSQH PEVAPALLRL LFHDCFIRGC DASVLLDxSH GNRRP 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (exon 1 and start of exon 2).
scaffold_7_25371 (5838..6332)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCTG GGGGTTGCCG AGGACAGCCT TCACCCGGGC GAGGGCGAGG GTCCCTCGCT TGCAGAACAT CTCCAAAGAA AACCAGGGTC GGAAGGTTAG AAGCCATTGC CAACTCCCTG  AACAAGTGGA TCGTCATCTT CGTTCTCTTC ATCTCCTTCC TCGTCTCGCT CAGGAATCAC AAGGGCTCAA GCGCAAATCA GCACGGACGG CGCTTCACCC TCCATTTTTC TCTGGATTCC  CTCTCCCCCG TCTTCCTTCA GAGGAACGAT GATGGCGTCA TCGACCGAGA AGACCCCGCG CTCGGGCTCC AGTACGACTT CTACCGCCAC ACGTGCCCTG CTGCCGAAGA AATCGCGAGG  TCATCCATGT CCAGAGTCTA CTCCCAACAC CCCGAAGTTG CCCCTGCGCT TCTCCGTCTC CTCTTCCACG ATTGCTTCAT CAGGGGCTGC GATGCTTCAG TTCTCCTGGA CGnTAGCCAT 
GGAAACCGAA GGCCC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCTG GGGGTTGCCG AGGACAGCCT TCACCCGGGC GAGGGCGAGG GTCCCTCGCT TGCAGAACAT CTCCAAAGAA AACCAGGGTC GGAAGGTTAG AAGCCATTGC CAACTCCCTG  AACAAGTGGA TCGTCATCTT CGTTCTCTTC ATCTCCTTCC TCGTCTCGCT CAGGAATCAC AAGGGCTCAA GCGCAAATCA GCACGGACGG CGCTTCACCC TCCATTTTTC TCTGGATTCC  CTCTCCCCCG TCTTCCTTCA GAGGAACGAT GATGGCGTCA TCGACCGAGA AGACCCCGCG CTCGGGCTCC AGTACGACTT CTACCGCCAC ACGTGCCCTG CTGCCGAAGA AATCGCGAGG  TCATCCATGT CCAGAGTCTA CTCCCAACAC CCCGAAGTTG CCCCTGCGCT TCTCCGTCTC CTCTTCCACG ATTGCTTCAT CAGGGGCTGC GATGCTTCAG TTCTCCTGGA CGnTAGCCAT 
GGAAACCGAA GGCCC 

Retrieve as FASTA