Entry information : EguPrx[P]140
Entry ID 11451
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EguPrx[P]140
Name EguPrx[P]140
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]140
start..stop
S start..stop
EgrPrx179 276 7e-98 1..141 1..141
EgrPrx177 277 2e-95 1..141 191..331
EgrPrx[P]140 269 3e-95 1..141 1..141
EcamPrx177 275 2e-94 1..140 191..330
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6715..7137 423  
join(6715..7137)


exon

Literature and cross-references EguPrx[P]140
Protein sequence: EguPrx[P]140
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   141
PWM (Da):   %s   14656.27  
PI (pH):   %s   9.74
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGHTIGTGAx QFFxYRLYNF TNTTSSGADA SIDPSFVSQL QSLCPQNGDG TRRVALNTGS PSRFDASFFx NLRSGRGVLE SDQKLWTDAS TKTFVQGFLS GRGxTQLDFN TEFAKSMVKM 
SKIGVKTGTD GEIRKICSAI N 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (Short 3' end). Scaffold_9_33183 (6715..7137)
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAGGGCACA CCATAGGAAC TGGAGCTTnC CAATTCTTCA nCTACAGACT CTACAACTTC ACCAATACTA CGTCAAGTGG AGCGGACGCT TCCATTGATC CTTCCTTTGT TTCTCAACTC  CAGTCTCTGT GTCCGCAAAA CGGTGATGGC ACAAGGCGTG TTGCCCTCAA CACCGGCAGC CCTAGTCGTT TCGATGCATC CTTCTTCnCA AACTTGAGGA GCGGAAGGGG AGTTTTGGAG  TCCGATCAGA AGCTnTGGAC CGATGCCTCC ACCAAAACCT TCGTGCAAGG CTTTCTAAGC GGCAGAGGCC nGACCCAGTT GGACTTCAAC ACGGAGTTTG CTAAATCGAT GGTGAAGATG 
AGTAAGATTG GTGTGAAGAC GGGCACCGAT GGTGAAATTA GGAAAATATG CTCCGCCATT AAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAGGGCACA CCATAGGAAC TGGAGCTTnC CAATTCTTCA nCTACAGACT CTACAACTTC ACCAATACTA CGTCAAGTGG AGCGGACGCT TCCATTGATC CTTCCTTTGT TTCTCAACTC  CAGTCTCTGT GTCCGCAAAA CGGTGATGGC ACAAGGCGTG TTGCCCTCAA CACCGGCAGC CCTAGTCGTT TCGATGCATC CTTCTTCnCA AACTTGAGGA GCGGAAGGGG AGTTTTGGAG  TCCGATCAGA AGCTnTGGAC CGATGCCTCC ACCAAAACCT TCGTGCAAGG CTTTCTAAGC GGCAGAGGCC nGACCCAGTT GGACTTCAAC ACGGAGTTTG CTAAATCGAT GGTGAAGATG 
AGTAAGATTG GTGTGAAGAC GGGCACCGAT GGTGAAATTA GGAAAATATG CTCCGCCATT AAT 

Retrieve as FASTA