Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
250 |
PWM (Da): |
25728.75 |
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PI (pH):
| 4.9 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
QGCNASVLLD GSTSEPSEQD TPPNRNLRCT ALQIxDLCDL VEKKCGRVVS CADIATIAAH DSIFLxGRPE YDVPLGRRDE LAxASVNETT KNLPSPAQSA SQILAxLAKK SFDATNVVTL
SGAHTIGLGH CGSFTxxLYP TPDPTMEKxF ARAxxxxCPT TNSTNTTVLD IQSPNRFDNR YFVNLVNxGL FTSDQDQYED PTTRDIVTSF AKDLELFFER FVLAMTKMGQ LGLLTGTKGE
IQARCSARNS
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (exon 1 and part of sequence are missing). scaffold_10_35080 (27302..28107) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAACGA GTGAACCGAG CGAGCAGGAC ACCCCACCGA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC
GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCGCCACCAT CGCCGCTCAC GATTCCATTT TCTTGGTAAA GTTGGATTTC TTTATCGGGG ATTAATTGTA AATAATGTGA
CCATGCATAA TATACCGTGT GCAGTnGGGC AGACCTGAGT ATGACGTGCC ATTGGGAAGG CGTGACGAAC TCGCTTnCGC GTCnGTAAAC GAGACCACAA AGAATTTACC TTCACCAGCT
CAGAGCGCCA GCCAAATTCT CGCTnCCCTA GCCAAGAAAA GCTTCGACGC CACCAATGTA GTGACACTCT CTGGAGCCCA CACCATCGGG CTTGGGCACT GTGGTAGCTT CACCnACCnG
CTCTACCCGA CCCCAGACCC CACnATGGAG AAAAGnTTCG CCCGTGCATG nnnnnnnnnn TGCCCCACTA CAAACTCCAC GAACACCACA GTCCTGGACA TCCAATCGCC CAACCGATTC
GACAACAGGT ACTTTGTCAA TTTGGTGAAC CnnGGCCTGT TCACGTCGGA CCAAGATCAA TATGAGGACC CCACnACGAG GGACATCGTT ACTAGCTTCG CCAAGGACCT GGAATTGTTC
TTCGAGAGGT TTGTTCTCGC TATGACCAAG ATGGGGCAGC TTGGCCTGTT GACTGGGACG AAAGGAGAAA TCCAAGCCCG CTGCTCGGCC AGGAATTCC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAACGA GTGAACCGAG CGAGCAGGAC ACCCCACCGA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC
GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCGCCACCAT CGCCGCTCAC GATTCCATTT TCTTGTnGGG CAGACCTGAG TATGACGTGC CATTGGGAAG GCGTGACGAA
CTCGCTTnCG CGTCnGTAAA CGAGACCACA AAGAATTTAC CTTCACCAGC TCAGAGCGCC AGCCAAATTC TCGCTnCCCT AGCCAAGAAA AGCTTCGACG CCACCAATGT AGTGACACTC
TCTGGAGCCC ACACCATCGG GCTTGGGCAC TGTGGTAGCT TCACCnACCn GCTCTACCCG ACCCCAGACC CCACnATGGA GAAAAGnTTC GCCCGTGCAT Gnnnnnnnnn nTGCCCCACT
ACAAACTCCA CGAACACCAC AGTCCTGGAC ATCCAATCGC CCAACCGATT CGACAACAGG TACTTTGTCA ATTTGGTGAA CCnnGGCCTG TTCACGTCGG ACCAAGATCA ATATGAGGAC
CCCACnACGA GGGACATCGT TACTAGCTTC GCCAAGGACC TGGAATTGTT CTTCGAGAGG TTTGTTCTCG CTATGACCAA GATGGGGCAG CTTGGCCTGT TGACTGGGAC GAAAGGAGAA
ATCCAAGCCC GCTGCTCGGC CAGGAATTCC
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Retrieve as FASTA
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